Alicyclobacillus fastidiosus: NZD89_01470
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Entry
NZD89_01470 CDS
T08690
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
afas
Alicyclobacillus fastidiosus
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afas03032
]
NZD89_01470
03036 Chromosome and associated proteins [BR:
afas03036
]
NZD89_01470
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_01470
DNA replication proteins [BR:
afas03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NZD89_01470
Chromosome and associated proteins [BR:
afas03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NZD89_01470
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NZD89_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
SasG_E
Ribosomal_L12
UPF0181
Motif
Other DBs
NCBI-ProteinID:
WAH42212
LinkDB
All DBs
Position
322853..323125
Genome browser
AA seq
90 aa
AA seq
DB search
MNKMELINQVADKTGLKKKDAEQAVNSVFEIIEETLSSGEKVQVIGFGTFETRARAARSG
RNPQTGEVIEIPASTVPAFKPGNKLKESTR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaatggaattgatcaaccaagtggccgacaagactggtctgaagaaaaaagac
gccgaacaggccgttaacagcgtatttgaaatcatcgaggaaacgttgagctccggtgag
aaggttcaagtcattggctttggcacgtttgagacgcgtgcgcgcgctgcccgctcaggc
cgcaacccacaaactggcgaagtgattgagattccagcttcgacggtcccagcttttaaa
ccaggcaacaagctcaaggagagcactcgctaa
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integrated database retrieval system
