Alicyclobacillus fastidiosus: NZD89_04555
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Entry
NZD89_04555 CDS
T08690
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NZD89_04555 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afas03019
]
NZD89_04555 (recQ)
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_04555 (recQ)
Enzymes [BR:
afas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD89_04555 (recQ)
Messenger RNA biogenesis [BR:
afas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NZD89_04555 (recQ)
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NZD89_04555 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WAH42712
LinkDB
All DBs
Position
875668..877464
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AA seq
598 aa
AA seq
DB search
MRGGDKRMNEARELLRKYYGYEDFRPGQSRIVESVLKGCDTVGIMPTGGGKSICYQIPAL
MCEGMSIVVSPLISLMKDQVDTLSNVGISATYINSSLPAAEVHARMRQAEQGEYRLLYVS
PERLEAGAFMSFVNRLCPQMIAIDEAHCLSQWGHDFRPSYRAIAPLLQQLDNRPIVAAFT
ATATPEVIRDIVDTLGLHNPNVFVTGFDRSNLTFSVVTGQDKRDYVLDYLERHPNDAGVI
YASTRKEVDGLYEFLKKKRYAVGRYHAGLSDAERSANQEQFLYDETRIMVATNAFGMGID
KSNIRFVLHYNMPKTLESYYQEAGRAGRDGDPAECVLLFTPRDVQLQKFLIEQTDTAPER
KSHEYQKLQAMVDYCHTSMCLRAHILRYFGEDNGPDRCDNCSNCNGDFETQDITVIAQQI
FSCVLRMKERFGVKLLAGVLKGSRDKRIQELDLHTLSTYGLMKNRTEKEVVSYIQTLLAD
GYLKLSEGQFSVVQLQPAAVPVLKGQSSVVIRVPKQAEVTAQPDDELFEDLRALRRALSQ
RDKVPPYVIFSDSTLREMSLHCPVDDTAMLRIKGVGQMKMERYGAEFLAVCQQHATGR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcggcgacaagcgaatgaacgaagcgagagaactattaagaaagtactacgga
tatgaggattttcggccaggtcaaagccggattgtcgagagtgtgctgaagggctgcgac
acggtcggaatcatgcccacaggcggcggaaaatccatttgctatcaaattccggcactg
atgtgcgaggggatgtcgattgtcgtttcaccgctcatctccttgatgaaagaccaagtg
gatacgctgtccaacgtggggatttccgcgacgtatatcaatagcagtctgcctgcggca
gaggtgcacgcgcgcatgcgacaggcggaacaaggggaatatcggctcttgtacgtctct
ccggagcggttggaggcgggggcgttcatgtcgtttgtcaatcgcctctgtccacagatg
atagcgattgacgaggcgcactgcctgtcgcagtggggtcatgactttcggccaagctac
cgcgcgatagcaccattgttgcagcaactcgacaatcggcccatcgtggccgcctttacg
gcgaccgccacgcccgaagtgattcgagacatcgtcgacacgttgggtcttcacaacccg
aacgtcttcgtgacgggatttgaccggagtaacctcacattttcagtcgtcactgggcag
gacaagcgggactacgtactcgactacctcgaacggcacccgaacgacgccggcgtgatt
tacgcatcgactcgaaaggaagtcgacggtctgtacgagttcttgaagaagaagcggtac
gctgtggggcgttatcacgcaggcctcagcgacgcggagcgaagcgccaatcaggagcag
tttctctacgatgagacgcgcataatggtggcgacgaatgcgtttggcatgggcatcgac
aagtcaaacattcggtttgtgctgcactacaacatgcccaagaccctggagtcgtactac
caggaagcgggtcgagcggggcgggacggcgacccggcagaatgtgttctgctatttact
ccgcgcgacgtgcagttgcagaaattcctcatcgaacagacagacaccgccccggagaga
aagtcgcacgagtatcaaaaactccaggcgatggtggattattgccacaccagtatgtgc
cttcgcgcgcacattttgcggtattttggcgaggacaacggaccggacaggtgtgacaac
tgcagcaactgcaatggcgactttgagacgcaagacatcacggtgatcgcgcaacagatc
ttctcttgcgtccttcgtatgaaggaacgatttggtgtcaaattgctcgcaggtgttctc
aaaggctcccgcgataagcgaattcaggaactagatctacatacgctctccacgtatgga
ttgatgaagaatcgaacggagaaagaggtcgtttcatacattcaaacccttttagctgac
ggttacttgaagttgtcagaggggcagttttctgtcgtccagctccagcccgccgccgtt
cccgtgctaaaggggcagtcgagcgtcgtgattcgcgttcccaagcaggccgaggttacc
gcgcagcccgatgacgagctgtttgaagacctgcgcgcgctgcgccgagcgctatcccag
cgggacaaagtaccaccatacgtcattttttccgacagtacgcttcgggagatgtccctg
cattgtccagtcgacgacactgcgatgctgcggatcaagggcgttggtcagatgaagatg
gagcggtatggagcggagtttctggcggtgtgccagcagcatgcgaccggccgatag
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