Alicyclobacillus fastidiosus: NZD89_05520
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Entry
NZD89_05520 CDS
T08690
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03030
DNA replication
afas03430
Mismatch repair
afas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NZD89_05520 (dnaE)
03430 Mismatch repair
NZD89_05520 (dnaE)
03440 Homologous recombination
NZD89_05520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afas03032
]
NZD89_05520 (dnaE)
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_05520 (dnaE)
Enzymes [BR:
afas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NZD89_05520 (dnaE)
DNA replication proteins [BR:
afas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NZD89_05520 (dnaE)
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NZD89_05520 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
WAH42888
LinkDB
All DBs
Position
1061983..1064994
Genome browser
AA seq
1003 aa
AA seq
DB search
MAQFVHLHVHSAYSLRESTLRLGQLVEDVAAYEMPAVALTDTNAMYGAIPFYQKAIQLGV
QPILGAQLDVCFAEPHDLPQTRDAFQASLERTVMLARSLDGYRGLTRLITMARSRGHLPY
VTLAELAAISTDLVCLVGGGESTMLRTFAAERSANASAALRLAQFAGACPSGQLFVDVQN
HRLPHEEAGYVHLLHAASQQDIPLVATNDVHYRKAGDAALHRAYAGLEFANAQERWGSDT
FHLAPPREMVERFASLPQALDNTLHIAEMCKFKLPLHQVRMPSYPTKDGRDPREVLREAS
TAGAKQRYGALSEEVQARLDHELGVICDMGYADYFLVVADFIRYAHQHGISTGPGRGSAA
GSLVAYALRITDVDPVANRLLFERFLNPARVSLPDIDTDFEFERRGEVIQYVVQKYGRDR
VAQIGTFGTLAARAAVRDAGRMLQMDGAMVDRLAKLVPGVPGMTLDKARQEAPAFDRVVT
DDSDAKRLYETALFLEGLPHHTSVHAAGVVISPDPLTDWVPLEPGADDIPVTQYAMAEVE
SLGLVKMDFLGLRTLTLMDDCARSVNGRTGVAIDWRKVPVDDKATYGNLTNADTNGVFQL
ESPGMRRVLRQLKPSNMDDIVAVISLNRPGPMENIPAFCDAKHGRAPIHYPHPDLEPILR
DTYGVIVYQEQIMQIASQMAGFSLGEADLLRRAVSKKKREALDEERERFVQGCLKKGYDG
ATANDVYDLIVRFADYGFNRSHAAAYAVLAYRTAYLRTHYLPDFLAALMTMSMSSADKMK
AYAADARRHQIAVLPPSVVTSARGYSVDQDGDIRTGLLAVRNVGEGAVEAILEARKSAPF
TSLRDFLQRVNTRVVNRKALDSLLQAGAFDEFFPADSDALAKAQMLEEAQRQADEYRQFA
GLGLMLDADSLDASGEREASAQTGQEVLYIRYSSGTQQGKMALKKIQQVLTTSPGEVRVA
LYDVKTRRTRLLGDKWNIALSPELMTLLEDVVGMGNVKVSLRK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttgttcatctacacgtacatagtgcatactcgcttcgcgaaagcacgctt
cgcctcggccaactcgtcgaagatgtggccgcctacgagatgcccgcggtcgcattgacc
gacaccaacgctatgtacggggccattccgttttaccaaaaagccatccaacttggcgta
cagcccattctcggcgcgcagttggacgtgtgctttgccgaaccacatgacctgccacaa
acgcgcgacgcctttcaggcaagtcttgagcggacggtgatgttggcgaggagcctcgac
ggttaccgcggattgacgcggctcatcacgatggcgagatcgcgagggcatctgccctac
gtgacccttgccgagctagcggccatctccactgatctcgtctgcctcgtcggcggcggc
gagtcgacgatgttgcgcacgtttgccgccgagcggtcggccaacgcttcggctgcgctc
cgcctcgcacagtttgccggggcatgcccatccggtcagctgttcgtcgacgtgcaaaac
caccggttgccgcacgaggaggcggggtacgtgcacctgctccatgcggcttcacaacag
gacatcccgctggtggccaccaacgacgtacactatcggaaggcaggggatgcggcgctc
caccgcgcgtatgcaggactcgagttcgcaaacgcacaggagcgctggggcagcgatacg
ttccatctcgctccaccgcgggaaatggtcgagcgctttgcgtcgttgccgcaagccttg
gataacacgttgcacatcgcagagatgtgcaagtttaagctgccgctgcaccaggtgcgc
atgccgtcgtatccgaccaaggacgggcgcgatccgcgcgaggtcttgcgcgaggcgtcc
acagctggggccaaacagcgctacggggcgctgtctgaagaagtgcaggctcgactcgac
catgaactgggcgtcatctgtgatatggggtacgccgattacttcctcgtcgtggcggac
tttattcgctacgcacaccagcatggcatctcgacgggcccgggtcgcggatcggcggcc
gggagcctcgtggcgtacgccttgcggatcacagacgtagatccggtcgccaaccgactt
ttgttcgaacgctttttgaaccccgctcgcgtgtcattgccggatatcgataccgacttt
gagtttgagcgccgaggtgaggtcattcagtacgtcgtgcagaagtacgggcgggatcgc
gtcgcccaaatcggcacctttggcacgcttgccgcgcgagcggcggtccgagatgccggt
cggatgctgcagatggacggtgcgatggtcgaccggctggcgaagctcgtccctggcgta
ccgggcatgacgctcgacaaggcgcgccaagaggcgccagcgttcgaccgtgtggtcacc
gacgacagcgacgcgaagcggctctacgagacggcgctgtttctcgaaggacttccgcac
cacacgtccgttcacgccgcgggtgtggtgatctcgccggatccactgacggattgggtg
ccactcgaacccggcgcggacgacatcccggtgacgcagtacgcgatggcggaagtggag
tcgttggggctcgtcaaaatggattttctcggcctgcgaacgctgacgctgatggacgat
tgcgcgcgaagtgtgaacgggcgaacgggtgtcgcgatagactggcggaaggttccggtg
gacgacaaagcgacgtacggcaatctgacgaacgcggacacgaacggcgtcttccagttg
gagtcgcctgggatgcggcgcgtcctgcggcagctcaaaccgtcaaatatggacgatatc
gtggctgtgatctcgctcaaccgcccagggccgatggaaaatatcccggcgttttgtgat
gcaaagcacgggcgcgcgcctatccattacccgcacccggatctcgagcccatcttgcgg
gacacgtacggggtcatcgtctatcaagagcaaatcatgcaaatcgcctcgcagatggcc
ggattttcgctgggtgaggcggacctcttgcggcgggctgtgagtaaaaagaaacgcgag
gcgctcgacgaggagcgggagcggtttgtacaggggtgtctgaaaaagggatacgatggg
gccaccgccaacgatgtttacgatctcatcgttcgcttcgccgactacggctttaaccgc
tcgcacgctgcggcatacgcggtgctcgcgtaccggacggcgtatctgcgcacgcactat
ttacctgattttttggcggcgctgatgaccatgtccatgtcgtctgccgacaaaatgaag
gcgtacgcggctgacgcgagacggcatcagattgccgtgctcccgccgtcggtggtgacc
agtgcacgcggatattcggttgaccaagacggcgacatccggactgggctcctcgccgtt
cgcaacgtcggcgagggtgcagtagaagcgattctcgaggcgagaaagtctgcgcccttc
acgtcgctccgggacttcttgcagcgcgtaaacacccgtgtcgtcaaccgcaaagcgctt
gacagtctgctgcaagccggcgcattcgatgaattctttccggctgattcggacgccttg
gcgaaagctcaaatgctcgaggaagcccagcgccaggccgacgaataccgccagtttgcc
ggactcggcctcatgctcgacgcggacagcctcgacgcctctggtgagcgcgaggcgtcc
gcacaaaccgggcaggaggttttgtacatccgctatagcagcggcacgcaacaagggaag
atggccttgaagaaaatccaacaggtcctcacgacttcccctggcgaggtcagagtggcg
ctctacgacgtcaagacgaggcggacgcgtctgctcggtgacaagtggaatatcgccctg
tcgccagaactgatgacgctgctcgaggacgtggtcggaatgggcaacgtcaaggtcagc
ctgcgcaaatga
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