Alicyclobacillus fastidiosus: NZD89_06180
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Entry
NZD89_06180 CDS
T08690
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas00550
Peptidoglycan biosynthesis
afas01100
Metabolic pathways
afas01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NZD89_06180
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NZD89_06180
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afas01011
]
NZD89_06180
Enzymes [BR:
afas01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NZD89_06180
Peptidoglycan biosynthesis and degradation proteins [BR:
afas01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NZD89_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WAH42999
LinkDB
All DBs
Position
complement(1207384..1209447)
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AA seq
687 aa
AA seq
DB search
MNNKPKTIKKMLRINVVYSIIFLSFTGLVLRAAYVEIAKGPTFRNAEVNTQFVTVAEAPQ
RGWIYDANGQVLAWDTPSDNIVLDNFTTIPSNTLHNIANQLAPVLNETPQKLYHTMTTDK
TDLQIPLATNATESQIAYVVEHNSDLPNVEITQTYQRQYPEGDLAGQVLGYVGSITAQNK
STYVDKDHYLISQKVGVTGIEEEYESTLQGKAGDEMLTVDPSTGAVQTVGSAPPALAGDN
IQLTLDGHLQADAQNIVMNLIKQQNDQGIITNASAVMLNVKTGGVLSMVSYPYLNPNWFT
DGKPITNAEANYLNSGAEVNYAIQDRQNPGSTVKPANLLTAFKQGAMSPDSTLYDAGLLY
IGKTRLNEDMNMVFGELDPIRAIAVSSDVFFYQVGLQLGKWFGSSASSGGSYPPSDGSYQ
HYLNTDFAKGINELFQGEWDFGLGPKTGIDLPNEIGGQFYIYDTQQGLTVPYDLQQSEAS
IKKTGEYPNNGTPASLAEGGIGQSQEFTTMQLATYAMTLANNGKKLQPHLLDKVYNSSDT
PTNGAKPVSTYKTKVTGQVSGSAQDYALIRQAMYDVTTGGEDATANGLFNNSPYQVAAKT
GTAQITIHGQKTDNSVFICYAPLNNPQVAMAVMIPGGGYGASLAGVIAKQMLDAYFDEHH
ASFMPKQDWTNTQIPSNWASSPANQLP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaagccgaaaacaataaaaaagatgctccgcatcaacgtcgtgtattcgatt
atttttttgtcgttcaccggccttgtgttgcgcgcggcgtacgtcgaaatcgccaaaggc
ccgacgtttcgcaacgccgaggtgaacacgcaattcgtcacagtggcggaagcgccgcag
cgcggttggatttatgacgcaaacggccaggttctcgcctgggacacgccatccgacaac
atcgtgttggacaacttcacaaccatcccgtcaaacaccttgcacaacatcgccaaccag
ttggcaccggtgttaaacgagacaccacaaaagctgtatcacacgatgaccaccgacaag
acagacctgcagattccgctggcgacgaacgcgacggagagtcagattgcatatgtggtc
gagcacaattccgatttgccgaatgtcgagatcacgcaaacctatcaacgtcagtaccca
gaaggcgacttggcgggccaagtgctagggtatgtcggcagcattaccgcccagaacaag
tccacctatgtcgataaagaccactatttaatcagtcaaaaagtcggtgtcaccggaatt
gaagaggagtacgagtcgacgctgcaaggtaaagccggggacgagatgctcacggtcgat
ccctccacaggcgcggttcaaaccgtcggttccgcaccgcctgcgctcgcgggtgacaac
attcagctcaccctggatggccacctccaagcggatgcgcaaaatatcgtcatgaacctg
atcaagcagcaaaacgaccaggggattatcaccaacgcgtccgccgtgatgctcaacgtg
aaaaccggcggcgtcctttccatggtcagttacccgtatctgaatcccaactggtttacc
gatggcaagccgattacaaatgccgaagcaaattatctaaattcgggtgcagaggtaaac
tacgcgattcaagataggcagaacccagggtccaccgtgaagcctgccaatctgctcacc
gccttcaaacaaggggcgatgtcgcctgactccacactgtacgatgccggccttttgtac
atcggtaaaacccggctgaatgaggacatgaacatggtgttcggcgaactggatcccatt
cgcgccatcgccgtctccagtgacgtgttcttctatcaggtcgggttgcaactcggaaag
tggttcgggagcagcgcctcgagcggcggcagttatccgccgagcgatggaagctatcaa
cactacttaaacaccgactttgcaaaaggaattaacgagctcttccagggcgaatgggat
tttggcttagggccgaaaaccgggattgacctgccgaacgaaatcgggggacaattctac
atttacgacacccaacaagggctcaccgtcccgtatgacctccagcagagcgaggcgtcc
atcaagaagaccggggaatacccaaacaacggtacacccgcgagcttggcggagggcggt
atcgggcagtcgcaagagtttacgaccatgcaattggcgacgtacgcgatgacgttggcc
aacaacggcaagaaactgcagccacacttgctagataaggtgtacaactcgagtgacacg
ccaacgaatggcgctaaacccgtgtctacgtacaagaccaaggtcacgggccaggtaagt
ggatcagcgcaagattacgcgctcatccggcaggcgatgtacgacgtgaccaccggagga
gaagacgcgacggcaaacggactgttcaacaattcgccttatcaagtggcggcgaaaacc
ggtacagcccagatcacgattcacggtcaaaagacggacaactcggtgttcatctgctat
gcgccgctaaacaacccacaagtggcgatggccgtaatgattcctggcggtggttacggt
gcatcgctcgccggcgtcatcgcgaaacagatgctcgacgcgtacttcgacgagcaccac
gcgtcgttcatgccgaagcaggattggacgaatacccaaattccgtccaactgggcgtcc
tcaccggccaaccagttgccataa
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