Alicyclobacillus fastidiosus: NZD89_13725
Help
Entry
NZD89_13725 CDS
T08690
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
afas
Alicyclobacillus fastidiosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_7
HTH_3
TPR_8
TPR_10
HTH_19
TPR_16
RNPP_C
TPR_MalT
TPR_19
HTH_31
SNAP
TPR_6
PPR
TPR_17
Clathrin
PPR_2
Motif
Other DBs
NCBI-ProteinID:
WAH44349
LinkDB
All DBs
Position
complement(2754495..2755790)
Genome browser
AA seq
431 aa
AA seq
DB search
MDTLGKKIRTLRRKQKLTQQALADGIVTASMISQIESDRATPSAALLQHIARRLQVDSSY
FESDLLDKSDELQNYRTARNLIDRELYEEALSLLQTLSWPLSPQFKAEVVYNEMANCYLK
LGKLDEACRMYECVIQAGYEKNDVATAIHGYYNVGIVLRRLKRDRVARMYWQRAAELLQQ
NPDIQMPVAVRIYSNLGRIYLDERNWQRARQTYEETLSLMNRFGGNFDTAKVYQGLSCAL
MQLREFDLALAYIDTAIAINVTAQNVKGAAKCRINRSVILRAAERHKEALEYIQSLRSSI
SDKDDLLMLAIHHELALIYWHLDDFEGVLAESDTALHRSNIAPEIEAELRLLRARIHVMN
GSVEFALREIERGRRLLSAEQPTSLWLAFQDVRRQCWLKSGRERDAIAECMAQAEQLVSN
DHKPTNQNISA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggacacgctcggcaaaaaaattcggactcttcgcagaaagcaaaaattaacgcagcaa
gccctcgcggatggaattgtcacggctagcatgatcagtcagatcgaatctgatcgagca
acaccttctgcagcgttactgcaacacatcgcgcgtcggctgcaggttgactcgtcttat
ttcgagtctgatttattggataaatcggatgagttgcagaactatcgaaccgcccgcaac
ctcatagaccgagagctgtacgaagaggccctctctctcctgcagaccttatcttggccg
ttatccccgcagttcaaagcagaggtcgtctacaatgagatggcgaactgctacctcaag
ctggggaaacttgacgaagcctgtaggatgtacgaatgtgtcatccaagctggttacgag
aagaacgacgtcgcaacggccattcacggctactataacgtcggcatcgtgctgcgtcga
ttgaagcgggaccgcgtggcgaggatgtattggcaacgcgctgcggagttgctccagcag
aacccggacattcaaatgcccgtcgccgtgcgcatctactcgaatttagggcgcatctac
ctggacgagcgcaactggcagcgcgctcgtcaaacgtatgaagagacgctttccctcatg
aatcgattcggcggaaattttgatacggcaaaagtctatcaaggtctttcgtgtgctttg
atgcagttgcgggagtttgacttggcactcgcctatatcgacacggcgattgccatcaac
gtgactgctcaaaatgtcaagggagcggccaagtgccggatcaaccgaagtgtgattctc
agagcagcagagcgccacaaggaagcgctcgagtacattcagtcgctgcggtcatccata
tccgacaaggacgacttgctgatgttggctatccaccacgaattggcgttgatttattgg
catttggacgatttcgagggcgtgttggccgagtcggatacggccttgcaccgctccaat
atcgctccagaaatagaggcagaacttcgtctattgcgggcgaggattcatgtgatgaac
ggatccgtggagtttgcactgcgggagattgaacgaggtcgccggctcctctcggcagaa
cagccgacgtctctgtggctcgcgtttcaggacgtgcgcaggcagtgttggctcaaatcc
ggacgtgaacgcgacgccatcgcggagtgtatggcacaggccgaacaactggtcagcaat
gaccacaaaccgacaaatcaaaatatttccgcgtaa
DBGET
integrated database retrieval system
