Alicyclobacillus fastidiosus: NZD89_14770
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Entry
NZD89_14770 CDS
T08690
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
afas
Alicyclobacillus fastidiosus
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NZD89_14770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_14770
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NZD89_14770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
WAH39681
LinkDB
All DBs
Position
2955493..2956311
Genome browser
AA seq
272 aa
AA seq
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MHSMWKGSISFGLINVPVRMFKATESQGVRFRQLHKACKTPIQYHKTCPTCQVELKSEDI
VRGFEYAKGQFVVIDDEELEALTKTRSQTLDIVHFAQAEEVDPVYYDNTYYLAPEANGRK
AYALLADALGNTGRIAVATSVLRQNESMACIRMKDGVLILQTLFWPDEVRQTGELPFVHQ
PPAVAPEELEMAEKLIEQLSKPFDPAAFHDERREQVQKLVEQKLADADPEELAPAATAPA
ADVISLMDALQKSLKMAEPAVKRKRTTRKKTS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcatgtggaagggttcgattagttttggcctgatcaacgttcctgtgcggatg
ttcaaggcgacggagtcacaaggtgtacggtttcggcaactccacaaggcttgtaaaacg
cccatccagtaccacaaaacctgtcctacgtgccaggtcgaactcaagtcggaagacatc
gtgcgcggatttgagtatgccaaaggtcaatttgtcgtgatcgacgacgaagaactcgaa
gcgctcacgaaaactcgttcacaaaccctcgatatcgttcacttcgcacaagcagaagaa
gtcgatccggtctattacgacaacacgtactacctagcgcctgaggccaatggccgcaag
gcttacgcgctgttggcggacgcgctcggcaacactgggcgcatcgcggtggcgacgtcc
gttctgcgccagaacgaaagtatggcctgcattcggatgaaggacggcgtgctgatttta
cagacgctgttttggccagacgaagttcgccagaccggtgagctcccgtttgtccaccag
ccgcctgcggtagcccctgaggagttggagatggcggagaagctgattgaacagctgtcg
aaaccgttcgatccagccgcttttcacgacgagcgtcgcgaacaggtgcagaaactggtg
gaacagaagctggcggatgccgaccctgaggaactcgcgcccgctgcgaccgctccggcc
gcggacgtcatcagcctgatggacgcattgcagaagagcctgaagatggccgaacccgca
gtcaagagaaagcgtaccacgcgcaagaaaacgtcgtga
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