Alicyclobacillus fastidiosus: NZD89_16065
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Entry
NZD89_16065 CDS
T08690
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
afas
Alicyclobacillus fastidiosus
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afas03000
]
NZD89_16065
Transcription factors [BR:
afas03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NZD89_16065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_31
HTH_19
HTH_25
HTH_26
MarR
HTH_37
HTH_23
GH-E
HTH_IclR
HemN_C
Phage_CI_repr
Motif
Other DBs
NCBI-ProteinID:
WAH39913
LinkDB
All DBs
Position
3238778..3239116
Genome browser
AA seq
112 aa
AA seq
DB search
MIGERIKQLRLAKGLSLSELAELSGVAKSYLSAIERSLQGNPSIQIIEKLASVLNVSVPA
LLLPDDVDAGENEVLDPEWVKLAQEAMNSGITKEQFREYLEFHKWRLKNGEQ
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
ttgattggcgaacgcatcaagcagctacgactggctaaagggctttcactgtctgaactc
gcggagttatcaggtgtggcgaaatcttatctgagtgctatcgaacgctctcttcagggc
aatccttccattcagatcattgagaaactcgcttctgtactgaacgtatctgttccggcc
ttattacttccggacgatgtggacgcaggagagaacgaagtgcttgatcctgagtgggtg
aaattagcacaagaggccatgaattcgggcatcacgaaagaacaatttcgtgaatacctc
gagtttcacaaatggcgattaaagaacggggagcagtga
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