Alicyclobacillus fastidiosus: NZD89_17480
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Entry
NZD89_17480 CDS
T08690
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NZD89_17480 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afas03019
]
NZD89_17480 (pnp)
03016 Transfer RNA biogenesis [BR:
afas03016
]
NZD89_17480 (pnp)
Enzymes [BR:
afas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NZD89_17480 (pnp)
Messenger RNA biogenesis [BR:
afas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NZD89_17480 (pnp)
Transfer RNA biogenesis [BR:
afas03016
]
Prokaryotic type
tRNA degradation factors
NZD89_17480 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Sec8_C
DUF2959
SPATA25
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
WAH40167
UniProt:
A0ABY6ZBC6
LinkDB
All DBs
Position
complement(3553098..3555212)
Genome browser
AA seq
704 aa
AA seq
DB search
MVVRHEFQVGGRPFVLETGKLAKQATAAVNVRYGDTVVLCTVTASKEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFPEGFRNDVQVVDIVMSVDQD
CAPEIAAMIGTSASLTASDIPFDGPIAGVIVGLVDGEFILNPTIEQASKSDMHLVLAGTK
DAIVMVEAGANEVPEDIVLEAVLFGHRAIQEICKEIEAFAEKVGATKREVVLHRVDDAVN
EAVRAYATERTKTAVRNSDKLAREAALSELNEEVQAHFAEQFPEMQDAIAEILHDILKEE
VRRAILNEGIRPDGRKLTEIRPISCEVGVLPRTHGSGLFTRGQTQALSVCTLGAMGDEQM
LDGLELEASNRYMHHYNFPPFSVGEARPLRAPSRRDIGHGALGERALDPVIPSPEEFPYA
IRVVSEILESNGSTSQASICGSTMALMDAGVPIKAPVAGIAMGLVKEQDQVAILTDIQGL
EDHLGDMDFKVAGTEKGVTALQMDIKIKGIDRQILERALSQAHEGRMFILGKMMEAISIP
REDLSKYAPRVITVQINPDKIRDVIGPGGRVINKIIEETGVKIDIEQDGRVFIHSSEVER
ANKAKEMIGNIVREVEVGHVYVGKVTRVEKYGAFVEVLPGKEGLVHISQLDVSRVAKVED
ICSVGDEITVKVTEIDNQGRINLSRKEVLKDSADKPTAHPSTRE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggtagtacggcacgaatttcaagttgggggacgaccattcgtcttagaaacaggcaag
ttggcgaagcaggccacggccgcggtcaacgtgagatatggagacacagtagtgctctgc
acggtgacggcgtcaaaagagccaaaggatttggatttctttccgttgacggtgaattac
gaggagcgcttgtacgcagtaggcaagattccaggaggttttatcaagcgtgaaggacgg
ccaagtgaaaaggcgattttggcctctcgcctgattgaccgcccgattcgccccctgttc
ccagaagggtttcggaatgacgtgcaagtggtggatatcgtgatgtctgtcgatcaggat
tgcgcaccggaaatcgccgcgatgattgggacctcggcatcgctgacggcgtctgacatc
ccgttcgacggaccgattgcaggcgtcatcgtggggctggtcgacggggagttcatcttg
aacccgacgatcgagcaagcttcaaagagcgacatgcatctcgtcttggctggtacgaag
gacgccatcgtcatggtcgaggctggggcaaacgaagttccggaagacattgtgctcgaa
gcggtactgtttggtcatagagcgattcaagagatctgcaaggaaatcgaagcgtttgct
gaaaaagtcggggccaccaagcgcgaagtcgtgttgcatcgcgtggatgacgctgtgaat
gaagccgttcgagcctatgccacggaacgcacgaagacggctgttcgaaattcggacaag
ctggcgcgcgaggctgcgctgtcagagctgaatgaagaagtgcaggcgcactttgcggaa
cagttcccggagatgcaggacgccatcgccgaaatcctgcacgacattctaaaagaggaa
gttcgccgcgcaattttgaacgagggcattcgcccagatggccggaagctgaccgaaatc
cgcccgatttcctgtgaggtcggcgtgctcccgcgcacgcacggttccggtttattcacg
cgcggtcaaactcaagcgctgtccgtctgtacccttggtgccatgggcgacgagcaaatg
ctcgacggattggaactcgaggcgtccaaccggtatatgcaccattataacttccctccg
ttcagcgtcggggaggctcgtccacttcgggcgccgagccggcgggacatcggacacggg
gcgcttggagaacgcgctttagatccggtgattccgtctccggaagagttcccttacgcc
attcgggtggtctcggagattctggagtcgaatggttctacgtcgcaggcgagcatttgt
ggcagtacgatggcgttgatggatgctggtgtaccgattaaggcaccggtcgcgggcatt
gccatggggcttgtgaaagaacaagaccaggttgccattttgacggacatccaaggtctc
gaggaccacctcggcgacatggacttcaaagtggcaggtacggaaaaaggcgttacggcc
ctgcagatggatattaaaattaaggggatcgaccgccaaatcctcgagcgggcgctttcg
caagcgcacgaaggccggatgttcatcttgggcaagatgatggaggctatttccataccg
cgtgaagatctatcgaagtacgcaccgcgcgtgatcactgttcagataaatcccgataag
atccgcgacgtgattggaccgggtggacgtgtgatcaacaagattattgaagagactggc
gtcaaaatcgacatcgaacaggatggtcgcgtctttatccacagctctgaagtagagcgg
gccaataaggcgaaagagatgattggcaacatcgttcgagaagttgaagtcggtcatgtg
tacgtcggtaaagtgacacgcgtcgagaagtacggggcgtttgtcgaagtcttgccgggc
aaggaaggactcgttcacatctcgcaattggatgtctcccgcgtggcgaaggtggaagac
atctgttcggtcggggacgaaattacggtgaaagtgaccgagatcgacaatcagggtcga
atcaacttgtctcgcaaggaagtcctgaaggacagcgcggacaagcctacggcacacccg
tcgactcgcgagtag
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