Alicyclobacillus fastidiosus: NZD89_21295
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Entry
NZD89_21295 CDS
T08690
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03030
DNA replication
afas03430
Mismatch repair
afas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NZD89_21295
03430 Mismatch repair
NZD89_21295
03440 Homologous recombination
NZD89_21295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afas03032
]
NZD89_21295
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_21295
Enzymes [BR:
afas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NZD89_21295
DNA replication proteins [BR:
afas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NZD89_21295
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NZD89_21295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WAH40806
UniProt:
A0ABY6ZEZ0
LinkDB
All DBs
Position
complement(4330258..4333368)
Genome browser
AA seq
1036 aa
AA seq
DB search
MFIHLHCHSQYSFLDGASSIESLVAQARMFQMPALALTDHNTIAGLPELHKWAGVYGIKP
ISGAEITLEDGAHLTLLVEKKRGYRNLCELLTLAHHGEGRRSAPRIDEETLFRLGDGLII
LSGCRNSPIRRHLRRQAYTAAKEWALRYKERFGDAFYLELQADGYPQSCGAMKDLYTLAQ
ETSIRAVATSNVHYVDKHLFPVHDVLRCIGLGCDVYTPHPGRPLNRQAWLHDAAEAQARY
GMYPQVMEETLNIANRCEVALSLTQTHFPQFSLPDAAGDRVSFLRELVYAGARDRYLRVD
AALKQRLEHELEIIVQLGYVDYFLVVWDIVRFARSRSIRCAGRGSAADSAVAYCLYITDV
DAASRGLLFERFMSLERAERPDIDIDFASDRRDEVMAYVYRKYGRDKVARVATYQTFRGR
SAVREIGAALALPHELLDTLAKRVPWSAHADQIDTLLDKVPELMEYAGERPKLRWLFQIA
RHVAGFPRHFGMHVGGMVVSRNELYNITSLQPSAKGEWITPFDKRTVEDVGLVKLDLLSL
RTMSAIENTVRLSRAGNRAIDYDNIPLDDEATLEMIRRGETMGVFQLDSPAQRALQSRLQ
ASGLEDIVASVALIRPGPIQGNMVDPFIARRHGIEPITYLHPKLEPILGKTYGVVLFQEQ
VIEIATAIAAFTPGEADDLRRVMSHARSHAEMEQIGQKFLAKATENGVTRDVANTIFSYI
QSYASYGFCEAHAAAFATTAFKTAYLVKHYPAQFYASILNQYPMGYYPVHVVCAEVRRRG
ISILPVDVNESMWSCTTPDEHSIRLGFQLVKRASAEVAQAVMDEREANGPFTCTEDFVMR
VQRADRLQVEHLIRVGAFDALEHVDRQLLLWHVPGWMAERQERDRPLFEGTRASVSGEYK
GVPGSLASRLVDEYNLLGVGVSGHWLELMREDLTQQGYMTVGQVLEAPDGQQVLVAGLAV
RPHRPPTKSGRTVVFFTLEDETNLLDATMFESVYHSEGAVLFTPYGRLLGLQGTVQRRGG
SRAQLLVEHIWSLTRG
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttatccacctacactgccattcgcagtactcatttttggacggcgcctcgagcatt
gaatccttggtcgcacaggcgagaatgtttcaaatgccggccctcgccctcacagatcac
aatactatcgcgggtttgccagagcttcacaagtgggcgggcgtgtacgggatcaaaccg
atttctggggcggagatcacgcttgaggacggggcgcatctcaccctgttggtggagaaa
aagcgcgggtatcgcaatctatgtgaactgctgacgctggcgcaccatggggaggggcgc
aggagtgcgccgcggatcgacgaagagacactttttcgcctaggcgacggcctgatcatc
ctgtctggctgccgcaatagtccgattcggcggcacctgcgcagacaggcgtacactgcc
gccaaggagtgggcgctgcgatacaaagaacgatttggcgatgcgttctatctcgagttg
caagcggatggctatccacaaagctgcggcgcgatgaaagacctgtacacattggcacaa
gagacgtctattcgtgctgtcgcgacgagcaatgtgcactacgtcgacaagcatttgttt
cccgttcacgacgtgcttcgctgtatcgggctcggatgcgatgtatacacgccgcatcca
ggtcgaccgctcaatcgccaagcctggttgcacgatgcagccgaggcacaggcgcgctac
ggcatgtatccgcaggtgatggaagagaccctgaacatcgcgaatcggtgtgaagtggca
ctctcgcttacgcagacccactttcctcagttttcgctgccggatgcagcgggggatcga
gtgtcctttttgcgcgagctcgtctatgccggcgctcgcgaccgctatttgcgcgtggat
gcagcgctcaaacaacgactcgagcacgaattggagatcatcgtccaactcgggtatgtc
gactattttctcgtggtttgggatatcgtgcgtttcgcgcgcagtcgatccatccgttgt
gcgggccgcggttccgcagcggattccgcggtcgcctactgcctctacatcacggatgtc
gacgcggcatcgcggggactgttgttcgagcggtttatgtcactcgagcgggcagagcgt
ccggacatcgacatcgatttcgcgagtgaccggcgcgacgaggtcatggcctacgtctat
cgcaagtacggtcgcgacaaagtcgcgcgcgtcgccacgtaccaaacgtttcgcggccgc
tctgcggtgcgcgaaatcggtgctgcgctcgcgttgccgcacgagctcctcgacacgttg
gcaaagcgcgtcccgtggtctgctcacgccgaccaaatcgatacgctcctcgacaaagtc
cctgagctcatggagtacgccggcgagcgacctaagttgcgctggctgtttcaaattgcc
cgccatgtcgcaggattccctcgccatttcggcatgcacgtcggcggaatggtcgtgagc
agaaatgaactgtacaatatcaccagtttgcagccgtctgccaaaggggagtggattacg
ccgttcgataaacgaaccgtggaagatgtcggactggtgaaactcgacctgctgtcgctt
cgcacgatgtccgccatcgaaaataccgtgcgtctgagtcgcgcgggaaatcgcgcgatc
gattacgacaacattccgctcgacgacgaagccacgctggagatgattcgccgcggtgaa
acgatgggcgtatttcaactagacagccccgcgcaacgcgcacttcagtcccgccttcag
gcgtcggggctcgaggatatcgtggcgagtgtcgcgctgattcgacccgggccgattcag
ggaaacatggtcgatccattcattgcccgccgccacggcatcgaaccgatcacctacctg
cacccgaagctggaaccgattctcggcaagacgtatggcgtggtgctctttcaggagcag
gtgattgaaatcgccactgccatcgccgcgttcacgcctggggaggcggatgatttgcgg
cgggtgatgagccacgcgcgaagtcacgcggaaatggagcagattggccaaaagtttctg
gccaaggcgacggagaatggggtgacccgggatgtggccaataccatcttctcctacatt
caaagttacgccagctacgggttttgtgaggcacatgccgccgcgttcgccactactgcg
ttcaagacggcatatttggtcaagcactatcccgcacagttttatgcgtccattctcaat
cagtaccccatgggttattatccggtccacgtggtgtgtgccgaagtgcgacggcggggg
atatcgattctcccggtcgatgtgaacgaaagtatgtggtcgtgcacaacgccagacgag
cacagcattcgccttggctttcagctcgtcaaacgggcgtcggccgaagtggcgcaggcg
gtgatggacgaacgggaggcgaacgggccatttacgtgtacagaggattttgtcatgcgg
gtgcaacgggcggatcggctgcaggtcgaacacctgattcgggtcggggcgttcgacgcc
ctcgaacacgtcgaccgacagctactcctgtggcacgttccgggctggatggcagagcgc
caagagcgagatagaccgcttttcgaaggcacccgcgcttcggtaagcggcgaatacaag
ggagtcccgggctcgcttgcgagccgtctagtagacgaatacaatttactaggcgttggt
gtctctgggcactggttagagttgatgcgcgaggatttgacgcagcaagggtatatgact
gtagggcaagtgcttgaggctccagacggccaacaggtcctcgtcgcggggctggccgtt
cggccgcaccgcccgccgaccaaaagtggtcgtacggtggtgttcttcacgctggaggat
gaaacaaatttgttggatgcgacgatgtttgaatcggtatatcatagcgaaggtgccgtg
ttgttcactccgtatggccgactcttgggattacaggggacggtgcaaaggcgggggggc
tcgcgtgcgcaattgctggttgaacatatctggtcactgacgaggggatga
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