Alicyclobacillus fastidiosus: NZD89_21320
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Entry
NZD89_21320 CDS
T08690
Name
(GenBank) DEAD/DEAH box helicase
Organism
afas
Alicyclobacillus fastidiosus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_22
SWI2_SNF2
AAA_11
AAA_34
Motif
Other DBs
NCBI-ProteinID:
WAH40811
UniProt:
A0ABY6ZFC9
LinkDB
All DBs
Position
complement(4336029..4339154)
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AA seq
1041 aa
AA seq
DB search
MSGEDMDDNQRALPFGLHFLVRETADGEDQAVFSWSEALARSDEEHLLAVAEQLVQNGII
PTFDVGARKLCLNAAGLIQLLTNLREMDEFILTRAPSSASGRTLQQAIAGLSLAREIVRA
RDILAGAFVTAFTVAHCLSVLRDAASSTDDVMPQWGSGNGTFVGMWLPAWSLLEFCSVRL
SILSGFQNGQPQVTDSSEQAAIDWWIMVCVDAIVREQLFDVIDSTASSGQSYRVMYRGEA
DVFEAWRASLKGATGQTFPGDGWLVARAMRQALQTSGWKASNLDDNSGKNFYTLSFQLVP
PLADSPSANWELVYQVKHRLLGWSKPLEDWWRQEERVWVIGEDTLVQPDVWMLPALRQAA
AVSREIKQSFALPAPSACEIAADDVYTFLTESVPRLRALGFSIDAPNVLRENGSRVRIRV
RVKRPKSEAKRAGGSSQQWFDANRLVDFDWSIVIDDEEISREAFAKLVANQTPFVQVEGS
WRLIPVDEILRQVEELGGVGKPLATRVLDLSRAILMSSDTAEVPVQVEYQEEAMPIEHVI
SVLTHASNPTLCDTPEAFRGQLRHYQQFGFSWLMHLRSIGCGACLADDMGLGKTVQVLAY
LLELEERGLKKGVHLLVCPTSLLPNWRAELAKFAPNLSVYVHHGSDRDLAAHVSPDKPVH
IVMTTYATLVRDIELLQELQFDAVVVDEAQNIKNADTKQAQAIRLIQAEHRIALTGTPIE
NRLEELWALMDFLNPGYLGSPSWFRKTLIDGTLRNPTGDTATKLQVLLRPVLLRRRKSDP
EIQTELPDKWEVSERALLTGEQAAMYQAMVDQLFTDITPLQGGGMSRRGQILATLVRLKQ
ICDHPCLISGGVASVNRSGKLRQLIELLQTVLDEGECALVFTQFRDMGEILCDTIEEQLS
VRPKFLHGGLSASTRGQIVDDFQKGKDPSPILVLSLRAGGVGINLTRANHVFHFDRWWNP
AVEDQATDRAYRIGQTKDVQVHKMICTGTLEERIDDLITTKRELSQAIVGGTNEWVTELD
DDALRELFTLSEQNIWEEEEA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaggacatggacgacaaccagagagcgttacccttcggccttcacttcctg
gtgagagaaactgccgatggagaagatcaagctgtgttctcatggtcggaagcgttggcg
cgttcagatgaagagcatctactggcagtggcagaacaattggttcaaaacgggattatt
cccacgtttgatgtgggcgcacgcaaactgtgcctaaacgccgcgggactcatccagttg
ttgacgaacttgcgcgagatggacgaattcatccttacgcgtgctccttcgtcagcaagt
ggtagaacgctccaacaagccattgcgggccttagtcttgcgcgtgaaatcgttcgcgcg
cgggacatcttagcaggtgcctttgtgactgcgttcacggtggctcattgtctaagcgtt
ttacgggatgccgcttcatctacggacgacgtgatgcctcagtgggggtccggcaatggc
acgttcgtcggcatgtggttgccagcttggtcgcttctagagttttgcagtgtccggttg
tcgattttatcgggtttccaaaacggccagccgcaggtgacggattcgagtgagcaagcc
gccatcgactggtggatcatggtatgtgtcgacgccatcgttcgcgaacaactgtttgac
gtcatcgattcgactgcatcttcggggcaatcgtacagagtgatgtaccggggcgaagcg
gatgtgtttgaagcgtggcgggcatcgctcaagggtgcgacagggcaaacgttcccggga
gacggctggctcgtcgcacgggcgatgcgtcaggcgctgcagacgtccggttggaaggcc
tcgaacctggacgataactccgggaaaaacttttatacgctgtcctttcaactcgtccca
ccacttgccgattcgccttccgcaaattgggagttggtttatcaggtcaaacaccggtta
ttaggttggtcgaagccgctggaagattggtggcgacaagaagagcgcgtttgggtgatc
ggcgaggatacgctcgtgcaaccggacgtctggatgctgccggcgcttcgacaggcggcg
gcggtgagccgtgagatcaagcagtcctttgcgctgccagcaccgagcgcgtgcgagatt
gcagcggatgacgtctatacgtttctcacggaatctgtaccgcgccttcgggcattggga
ttttctattgatgcgccgaacgtactgcgggaaaacgggtcgcgcgtgcggattcgcgta
cgcgtgaaacggcccaagtcggaggccaagcgcgccggcggatcttcgcagcagtggttt
gatgcgaatcggctggtggattttgattggtccatcgtgatcgacgacgaggaaatctcg
cgcgaggcgtttgcgaaattggtcgccaatcaaacgccgtttgtgcaagtcgagggttcg
tggcggctcattccggtggatgagatcctgcggcaggtcgaggagctcggtggcgtcgga
aagccgctcgccacgcgcgtgttggatttgtcacgggcgatattgatgtcctcggacacg
gccgaagtccccgtacaagttgagtatcaggaagaggccatgccgattgagcacgtcatt
tcggtcttgacgcacgcgtcgaatcccacgctgtgcgacacgcccgaggcgtttcgcggg
caattgcggcattatcagcaattcggtttctcgtggctcatgcatttgcgatccattggc
tgcggcgcttgtttggcggatgatatgggcctcgggaagacggttcaggtgctcgcgtat
cttttggaactggaagagaggggattgaaaaagggcgtccatttgctcgtctgcccgacg
tcgctcttgccaaactggcgtgccgaactggcgaagttcgcgccgaatctgtcggtgtac
gtacatcacggcagtgaccgagacttggcagcgcacgtgtcacctgacaaaccggtccat
atcgtgatgaccacgtacgctacgctcgttcgcgatatcgagctgttgcaggagttgcaa
tttgacgcggtggttgtggacgaggcgcaaaacatcaagaacgccgacacgaagcaggcg
caggcaatacggttgatccaagcggaacaccggattgcactcacaggtacgccgattgaa
aatcggttggaagaattgtgggcattgatggatttcttaaatccaggttacctcggctca
ccgtcgtggttccgcaagacactcatcgacgggacgttgcgcaatccaaccggtgacaca
gcgacgaagttgcaggtcctgcttcgtccggtcctgcttcgcaggcggaaatccgacccc
gaaattcaaacggaactgccggataagtgggaagtcagcgagcgtgcactactcacgggg
gagcaggcggcgatgtaccaggccatggtcgaccagctgttcacagacatcacgcctctg
cagggggggggcatgtcgaggcggggacaaattcttgcgacgttggtccgcctcaaacag
atttgtgatcacccgtgtctcatctctggtggagtcgcgtccgtcaatcgatccggcaag
ctccgccaactcatcgaattgctgcaaacggtgttggatgaaggagaatgtgcgctcgtc
tttacgcaatttcgcgatatgggcgagatcttgtgcgataccatcgaggaacagctgtcg
gtgcgtccgaagtttttacatggcggcctgtccgcttcgacccgcggtcaaatcgtcgac
gattttcaaaaggggaaagacccttcgccaatcctcgtcttgtcgcttcgtgccggaggc
gtcggcatcaacttgacgcgggccaaccacgtctttcactttgacaggtggtggaatccg
gctgttgaagaccaggcgactgaccgcgcgtatcgaattgggcagaccaaggatgtccag
gtgcacaagatgatttgtaccggtaccctcgaagagcgcattgatgatctgatcacgacc
aagcgcgagttgtcccaagcgattgtcggtggaaccaatgagtgggtgacagaactcgat
gatgatgcactgcgcgagttgtttacactcagcgaacagaacatttgggaggaggaagag
gcgtga
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