Alicyclobacillus fastidiosus: NZD89_21690
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Entry
NZD89_21690 CDS
T08690
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03420
Nucleotide excision repair
afas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZD89_21690
03430 Mismatch repair
NZD89_21690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_21690
Enzymes [BR:
afas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD89_21690
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZD89_21690
MMR (mismatch excision repair)
Other MMR factors
NZD89_21690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
ResIII
SpoVT_C
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
WAH40877
LinkDB
All DBs
Position
complement(4407363..4409501)
Genome browser
AA seq
712 aa
AA seq
DB search
MGDERLNLLEGLNPEQKQAVQTVSGPLLVVAGAGSGKTSVLTRRIAYLIGEHKVPVHQIL
AITFTNKAAREMKERIRKFIGARADDLWMGTFHSICVKILRREAEALGYSANFTILDSDD
QQALIAQSLLDLNCDLKKFDPRQIGSVISHWKNLMYTTADVKRLPLDESLNEAIAVDVYE
LYQARLFAANAMDFDDLIIQTVRLLQTDEDVLRRYQEKFRYILIDEYQDTNQAQYQLVQT
LAQAHRNLCAVGDADQAIYAWRGADSENMLRFERDYPEATVILLERNYRSTEAILSAANA
LIANNRKRREKVLRAVRGRGENVGVVCLTDSEQEAAFVAGTIAQHVADGGSYGDCAVLYR
ANAQSRVIEEALMGQAIPYTIVGGLTFYDRREIKDIFCYLRVLTNPKDEISLLRIINTPK
RGIGEQTVGRFLDHAHEAGITLFEALKFGEAAGVSNRASEAARQFHEQLQELMLWMEGMP
VSEYLAEVLHATKYRELYLQSGKKEDLQRVENIDELFSVTKSFDKRRGGTVQEFLAEVSL
LSDVDKEKEKGKGNVRLMTMHASKGLEFPLVFLIGVEEGLFPHPRSMDDEQAVEEERNLC
YVGMTRAMDQLYMTYAVERTLFGHVTNRDPSRFLGELPDDWVNKIDLAVQHNLAISPGMH
VRHVQYGEGIVLHVAAGKDGGDDQVQVMFHPSVGMKWIGKNLLRPKEESVVQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaacgtttgaatttgcttgaagggctaaatccggaacagaagcaggcagtt
cagacggtgagtggcccgcttctggtcgtcgctggagcgggaagcgggaagaccagtgtg
ctcacccgacggattgcgtacttgattggcgagcacaaggtaccggtgcatcagattctc
gccatcacctttacgaacaaagcggcgcgcgagatgaaggagcgcatccgcaagtttatc
ggtgcccgcgcagacgacttgtggatgggtacgttccacagcatctgtgtcaagatcctt
cgccgtgaggcggaggcgctaggctatagtgcgaatttcaccattctcgacagcgatgat
caacaggcgctcatcgcgcagagtttactcgacctaaactgcgatttgaagaagtttgac
ccccgacaaattggcagcgtcatatcacattggaaaaatctgatgtataccacagcggac
gtgaaacgtctaccactcgacgagtcgctcaatgaggctatcgcggtggacgtctatgag
ctgtatcaagctcgcctgttcgcggcaaacgccatggacttcgatgacctcattatccaa
accgtcaggttgctccagaccgatgaggacgtgctcaggcgctatcaggagaagtttcgc
tatatcctgatcgacgaataccaggacaccaaccaggcacagtatcaactcgttcagacc
ttggcgcaggcgcaccgcaatctttgtgcggtgggcgacgcagatcaggcgatttacgct
tggcgcggagccgacagcgagaacatgcttcggtttgagcgggactatccagaggccacg
gtgattttgctcgagcgcaactatcggtccaccgaagcgattttgtcggcggccaatgcg
ctgattgcgaacaatcgcaagcgccgggaaaaggtgcttcgcgctgttcgtgggcgcggg
gaaaacgtcggtgtcgtctgtctgacggacagtgaacaagaagcggcgtttgtcgcaggg
acgattgcgcaacacgtagcggatggcggcagttacggagattgtgccgtgttgtaccgc
gcgaacgcacagtcgcgggtcatcgaggaagcgctgatgggacaggctatcccctatacc
atcgtcggcggcctcacgttctacgatcgccgggagatcaaggatatcttttgctacttg
cgcgtgttgacgaatccgaaagacgagatctcgctcttgcggatcatcaatacgccaaag
cgcgggattggcgagcagacagtcggccgctttctcgatcacgcccacgaagcggggatc
accctcttcgaggcgttgaagtttggcgaagcggcgggtgtatcgaatcgggccagtgaa
gcggcacgtcagttccacgaacaattacaagaactcatgctgtggatggaaggcatgcca
gtcagcgagtatctggccgaagtgctgcacgccacaaagtaccgcgagttgtatctgcaa
tccggcaagaaggaagacctccagcgcgtggaaaacatcgacgagctattcagcgtcacc
aagtcgttcgataaacgccgcggcggcactgttcaggagtttctcgccgaggtgagcctc
ttgagcgacgtcgacaaggagaaagaaaagggcaagggcaacgtccggctgatgacgatg
cacgcgagcaagggcctcgaatttccactggtgtttctgattggcgtggaagaggggcta
tttcctcacccgcggtcgatggacgacgaacaggctgtggaagaagagcggaatctttgt
tatgttggcatgacgagggccatggaccaactatatatgacatatgcggtcgagcggacg
cttttcggccatgtgacgaatcgggatccgtcgagattcctcggcgagttgccggacgac
tgggtgaataaaatcgatctcgccgtgcaacacaacttggccatcagccctggcatgcac
gtgcgccacgtccagtatggcgaaggtatcgtcctgcacgtggctgctggcaaagacggc
ggagacgaccaagtgcaggtgatgtttcatccgtccgtgggaatgaagtggatcgggaag
aatctgttacggcctaaggaagaatccgtggtacaataa
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