Alicyclobacillus fastidiosus: NZD89_22145
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Entry
NZD89_22145 CDS
T08690
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03420
Nucleotide excision repair
afas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZD89_22145
03430 Mismatch repair
NZD89_22145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_22145
Enzymes [BR:
afas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD89_22145
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZD89_22145
MMR (mismatch excision repair)
Other MMR factors
NZD89_22145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
SLFN-g3_helicase
nSTAND3
AAA_11
AAA_16
DEAD
NACHT
ResIII
DUF1846
Motif
Other DBs
NCBI-ProteinID:
WAH40960
LinkDB
All DBs
Position
complement(4501098..4503266)
Genome browser
AA seq
722 aa
AA seq
DB search
MMESKSFDSAPKDPLQEERDHLEYVLAQIRKQLKRDGTRLLETDEDEDADEALTADEIAD
ATVAELARERFRKLRMATREPYFGRLDFLADGDARIDQMYIGKRGVDDPDTAERMILDWR
APAASLFYSFTGQGDEAAYESPEGPIHGQVYLKRNIVVRDGELQRVVDSYVHGQDTSATT
DEFLLYRLAENKDSRLRDIVSTIQAEQNDIIRADKNLAVIIQGVAGSGKTTVALHRLAYL
LYQHQERMSADRMAIFAPNAMFVDYISEVLPELGVGGIQQTTFADWALRILDYEVGLRDP
SHRLRDWFGLKAAGARRAEYRDVEAKGALSCRDALEAFLKEFERTCIPEADFSPFEGHTL
PLTDIVAWFRDEYSHYPLYQRRSRVLARVKRWMEIALKESSELDKKAQKRAATAKYRAYE
NLWPDFTPLALYRTFLDSQPGLGSASIHAPKKRGARYEVQAEDLAPMLYIHWRLQGVDPR
DRFDHVVIDEAQDFSPFQIAVLRNYCPSGSMTILGDLSQSIHTYQGITDWDAFMSQFPEG
HVGYYQLDVSYRSTFEIIEFANEIIRPFRQFREAKPVFRSGEEVVVEQVEWRTRLDQAVD
KLSALHREASTVALLTRTEEDAHVYHHACLEAGVDAHLIDAKQSEYHGGISVVPIYLAKG
LEFDSVLLVDVDEQHYDTSSLSAKLLYVGCTRALHRLHVHYTDALSPLIPRSDADERCGA
SG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatcgaagtcgttcgattctgccccaaaagatccacttcaggaagaacgagac
cacttagagtacgtacttgcacagatccgcaaacaattgaagcgcgatgggacgcgcctg
ctcgagacggacgaagacgaggatgccgatgaggccttgactgcggacgagattgccgat
gcgacggtcgcggaattagcgcgagaacgctttcgaaagctgcgcatggccacgcgggag
ccttactttggccgacttgacttccttgcggacggcgatgcgcgcattgaccagatgtac
atcggcaagcgaggcgtcgatgacccggacaccgccgagcggatgattctcgactggcgg
gcgccagcggccagcctcttctactcgtttactggacaaggtgacgaagcggcgtacgaa
tccccggaaggaccaatccacggacaggtgtatctcaagcgaaacatcgtcgtccgcgac
ggcgaactgcagcgcgtcgtggacagttacgtgcacgggcaggacacctcagcgacgacg
gacgagtttctgctgtaccgcttggcggaaaacaaagacagccgacttcgcgacatcgtc
tcgacaattcaggctgagcagaacgatatcatccgagccgacaagaatctcgctgttatc
attcagggggtcgcggggagtgggaagacgaccgttgccctacatcgtttagcctatctg
ttataccagcatcaggagcgaatgtcggccgatagaatggcgatttttgcaccgaatgcg
atgtttgtcgactatatctcggaggtgcttccggagctcggcgtcggtgggatccagcag
acgacatttgccgactgggcgctgcgaatccttgactacgaagtgggccttcgggaccct
agccatcgcctgcgcgactggtttggcttgaaggcggccggtgcgaggcgggcggaatac
cgcgacgtagaggcaaaaggtgcactttcttgtcgggacgctctggaggcgtttctgaaa
gaatttgagcgcacctgtatcccggaagcggactttagcccgttcgagggacatacgctg
ccactaaccgacatcgtcgcctggtttcgcgacgaatatagtcattatccgctgtatcaa
cgccgttcgcgcgtactcgcgcgggtgaagcggtggatggaaatcgcactcaaggagtcc
tcggagctcgacaaaaaggcgcagaagcgcgcggctacggcgaagtatcgagcgtacgaa
aacctctggccagattttacgccgctggccttgtaccgcacgtttttggatagccaaccc
gggcttggttccgcgagtattcatgcgccgaaaaagcggggggcgcgctacgaggtgcaa
gcggaggaccttgcgccgatgctgtacatacattggagattgcagggtgtggatcctcga
gaccgctttgatcacgtcgtgatcgatgaagcacaggacttctccccattccaaatcgcg
gtgttgcgaaactactgtcccagcggttcgatgacgattttgggcgatttgtcgcagagt
atccacacatatcagggaatcaccgattgggatgccttcatgtcgcaattcccagagggg
cacgtcggatattaccagttggacgtcagttatcgatcaacgtttgagatcatcgaattc
gccaacgaaattattcgcccatttcggcagttccgcgaggcgaaaccggtatttcgcagt
ggcgaagaggtggtcgtcgaacaagtcgagtggcggacgaggcttgaccaggcggtcgac
aaactcagtgctcttcaccgcgaggcgagtaccgtagcgctgctcactcgcacggaggaa
gatgctcacgtctaccaccacgcgtgtctggaagcgggggtggacgcgcatttgatcgac
gcgaagcagagcgagtaccacggcgggatttcggtggttcccatctatctcgccaaaggg
ctcgaattcgactccgtcttgctcgtagacgtggacgagcaacactatgacacgtcttct
ctgtcggcgaaactcctgtacgtcggttgtacgagagcgctgcatcggttgcacgtgcat
tatacggacgcgctctctccactcattccacgttctgacgccgacgagcggtgcggcgcc
tcgggatga
DBGET
integrated database retrieval system
