Alicyclobacillus fastidiosus: NZD89_25200
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Entry
NZD89_25200 CDS
T08690
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03420
Nucleotide excision repair
afas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZD89_25200 (pcrA)
03430 Mismatch repair
NZD89_25200 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_25200 (pcrA)
Enzymes [BR:
afas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD89_25200 (pcrA)
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZD89_25200 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NZD89_25200 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
WAH41499
LinkDB
All DBs
Position
complement(5176349..5178631)
Genome browser
AA seq
760 aa
AA seq
DB search
MALTEQPSAQSILQGLNSEQQRAVQTTDGPLLIMAGAGSGKTSVLTRRIAYLIAERRVPP
WAILAITFTNKAAREMRERIQVLVGNLGADIWTSTFHALCARILRRDIQRIGYATSFTVL
DSADQLSVIKRVMSDLNIDVKKYEPKAILHEISQHKNELRGGAKVRDMAGSPYERLVGDV
YLEYERRLRQNQSLDFDDLIFKTVELFRESPETLNYYQNRFTHVHVDEYQDTNHAQYMLV
KLLAQKRKNLCVVGDSDQSIYGWRGANIRNILDFERDYPDAQVIRLEQNYRSTGRILRIA
NEVIRNNRMRKEKNLWTSAGEGEKAYLHHASDERAEAIFVASQIEAHVKQGRKYPDFSVL
YRTNAQSRVIEEIFLQKGIPYRIYGGLKFYDRKEIKDVLAYLRLVLNPDDDVSFIRVVNV
PKRGLGQTSIDKLEDYARANACSLFDAAQRATSAGLSKRAASALQGFVQLILTLSQQRAF
LPLTDLTDELLLRSGYRESLEAEKTLEAQSRLENLDEFLSLTREFDENGTIDGEVSALEQ
FLTDVALVADSDLNKGKPEIEQDSQVVTMMTLHSAKGLEFPVVFLVGMEEGTFPHKRALD
AEEEMEEERRLCYVGITRAMERLYLTTCSSRMIFGERRPFTTSRFLAEMPEQDMEKEGFQ
MRSRADFGAAFRPSSTPASTVSSSPGIQGSRMTMPQSFGADLSVSYEPGDRVEHRKWGVG
EIVSKTGSGESLELIVRFLAPIGERKLFAKFAPITKVTAD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtggcattgacggaacagccgagtgcacagtccattttgcagggactcaattctgaacaa
cagcgtgcggtccagacgacggatgggccgcttctcatcatggccggcgcaggtagtggc
aagaccagtgtgttgacgcggcggatagcgtatctgatcgcagaacggcgggtgccccca
tgggccattttggcgattacattcacgaacaaagcagcgcgcgaaatgcgtgaacgcatc
caggttctcgttggcaatctgggtgcggatatctggacgtcgacctttcacgcgctgtgc
gcccgcatcctgcggcgggacattcagcggattggatacgcgacgtcgtttaccgtactg
gatagcgcagatcaactgtctgtgatcaagcgagtgatgtcagatttgaacatcgacgtg
aaaaagtatgaacccaaggccatcctgcatgagatcagccagcacaaaaacgagttgcgc
ggcggggccaaggtgcgggatatggcgggatcgccctatgaacggctggtcggggacgtg
tatctcgagtacgagcggcgtctgcgccaaaaccagtcgctcgatttcgatgacctcatt
tttaagacggtggaactgttcagggagtctccggagacgctgaattactaccagaatcgg
tttacacacgtgcacgtggacgagtatcaggatacgaaccacgcgcagtacatgctcgtc
aaactcttggcgcagaagcgcaaaaacctctgcgtcgtcggcgattccgaccaatccatc
tacgggtggcgcggtgccaacatccgcaacatcctcgacttcgaacgcgactacccggat
gcacaggtgattcggttagagcagaattatcgctcgacagggagaattttgcgcatcgcc
aacgaagtcattcgaaacaaccggatgcgtaaggagaagaatctatggaccagcgctggc
gagggcgaaaaggcgtatcttcaccacgcgtccgacgagcgcgcggaagcgattttcgtg
gcgagccaaatcgaagcgcacgtaaagcagggccgaaagtaccctgattttagcgttttg
tatcggaccaatgcccagtcgcgcgtcatcgaggaaatttttctgcaaaagggaattccg
taccggatttatggcgggctgaagttctatgatcgcaaagagatcaaggatgtcctcgca
tatctgcggctcgtgctgaacccggacgacgacgtatcgtttatccgcgtggtgaacgtc
cccaagcgggggcttggacagacgtccatcgacaaactggaggattacgcccgcgcgaat
gcgtgttcgctgttcgacgccgcacagcgcgccacgtcggcaggcctcagcaagcgggcc
gcgagtgcgctgcagggattcgttcaactcattctcactctctcgcaacaacgcgcgttt
ctcccgctcacggacttgacggacgaactgctgctgcgctcgggatatcgtgagtcactc
gaggccgagaagacgctggaggcgcagagcaggcttgaaaacttggacgagttcctgtcg
ctcacgcgggagtttgacgagaacggcaccatcgacggtgaggtgagcgccctggaacag
tttttgacagacgtcgcgctggtggccgacagcgatttgaacaagggcaagcctgaaatc
gagcaggatagccaggtcgtcacgatgatgaccctccactctgcgaagggactagaattc
ccggttgtcttcctggtcggcatggaagagggcacctttccgcacaagcgggccttggac
gcggaagaagagatggaggaggagcgccgcctgtgctatgtgggcatcacgcgtgcgatg
gagcgcctgtatctcacgacgtgcagcagccgtatgatcttcggcgaacggcgccccttc
acgacctctcggtttctcgccgagatgccggagcaggatatggagaaggaaggtttccaa
atgcggtctcgggcggactttggggccgcattccgcccgagttctacgcctgcttccacc
gtgtcgtcgagcccgggaattcaaggctcgaggatgacgatgccccaatccttcggtgcg
gatttatcggtttcgtatgagcctggagatcgcgtggagcaccgcaagtggggcgtcggc
gagatcgtctctaagaccgggagtggagagagtttggaactgattgttcgctttctcgct
cccatcggcgagcgcaaactgtttgcgaagtttgcgcccattacaaaggtgacggcagac
tga
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