Anoplopoma fimbria (sablefish): 129088580
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Entry
129088580 CDS
T09102
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129088580
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
129088580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
PMP1_2
Motif
Other DBs
NCBI-GeneID:
129088580
NCBI-ProteinID:
XP_054451913
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All DBs
Position
3:4488466..4577795
Genome browser
AA seq
1313 aa
AA seq
DB search
MGFRSKRSVGIITRVLLLLCSSYGTTGEEVCDGVLVSNLPPSSFRSSSQLSSSHAPGFAK
LNRRDGAGGWSPLTSDRYQWLEVDLGERTKITAVATQGRYGSSDWLTSYLLMFSDTGHNW
KQYRQEDSIGSFPGNSNADSVVQYKLQQPAIARFLRLIPLDWNPSGRIGLRLETYGCPYT
SDVVSLDGGSSSSLAYRLSPGPQGTSREVVSLKFKTLRNSGTLLHAEGEGGLGLSLELER
GKLLLLLRQGTPSSEPRRLASLGSLLDDQHWHHLALERRSSHLNLTVDKHMQRIQIPAEF
NSWDIEQLSVGTVQSRGSNKPVVFKRNFHGCLENLLYNGLNLIELAKHKDLKVTVMGNVT
FSCAESVSVAVTFPGPQSFLQLPGATASSSGGLSVGFEFRTWNKAGLLLTFDLPQEGGVV
WLYLSEARLRIQIHKAGRALLELSAGSALNDGQWHSVELNSRRGRLSITVDKEEGGSAQA
SHSFPVTVDGHLFFGGCPVEDDKLKCRNPFNVFQGCMRLLTLDNQIVDLILVQQKQLGIY
SNLQIDMCGIIDRCSPSRCEHGGRCSQSWTVFHCNCSGRGYSGATCHSSVYEQSCEAYKH
NGNTSGHFYIDVDGSGPIRPQLVYCNMTEENTWMVLQHNNSELTSLRPSPGVDQHSVHFD
YSTEEEQLLAVISQSEHCEQELSYHCRKSRLLNTPEGSPFSWWLGGPGPGRVQSYWGGAQ
PGSQQCVCGLQGDCVDPQHYCNCDADRVEWAEDSGLLTHMESLPVRSLVLGDIQRPESEA
AYRVGPLRCHGDKNFWNAAFFDKETSYLHFPTFHGELSADISFMFKTTASSGVFLENLGI
KDFIRIELSSSTRVVFSFDVGNGPLEVHVESSVPLNDNRWHRVRAERNVKEASLRLDELP
VATQEAPTDGHLHLQLNSQLFIGGTASRQKGFRGCIRSLQLNGVTLDLEERARITPGVRP
GCPGHCSSYGSLCQNQGRCVERANGFHCDCSLSAYTGVFCHTEVSASFKSGTSVSYTFKE
PYELSRNISALPSSIYSDMTLRGENISLSFRTNQSPALLLYVSSYYRESLALLINKHDKL
EVRYKLDSSRDAEVLRSRVKSLADGHLHTVSIRRLTDSVSLQIDQNPREDFNLTSDGEFN
AIKSLVLGRVHGSDDLDTDLSRLASLGFTGCLSVVRFNSISPLKAALLHPHTSPVIISGP
LVQSNCGSSASANPYAAENTHHLSDQSGSVGSGQPLVNAIRTDSALIGGVIAVVIFVILT
GLAITARFLYRRKETYRNQEVKGVKQEDSQDFPFNNQTDSQNVSTENPKEYFI
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaggagtaaaagatccgttgggattatcactcgagtcctcctgctcctctgc
agctcgtacgggacaaccggagaagaggtgtgtgacggcgtgctggtgtccaatctgccg
ccatcgtccttcagaagttcgtcacagctgtccagcagtcacgcgccaggcttcgccaaa
ctcaacaggagagacggagccggaggttggtcccctctcacctcagacaggtatcagtgg
ctggaggtcgacctcggcgagcggaccaagatcaccgccgtcgccactcagggccgctac
ggcagctctgattggctgacgtcgtacctgctgatgttcagcgacacgggacacaactgg
aagcagtacagacaggaggacagtatagggtcttttccaggtaacagtaatgcagacagt
gtggttcagtacaaactgcagcagccggccatcgctcgcttcctccgcctcattcctctg
gactggaaccccagcgggaggatcggactccggctggagacctacgggtgtccttacacc
tctgatgttgtgagtttggacggcggcagcagcagcagtctggcgtacaggttgagcccc
gggccacaggggacgtccagagaggtcgtctctctgaagtttaaaaccctgaggaattct
gggacactgctgcacgcagagggagagggaggactcggcctcagtctggagttggagaga
ggaaagctactgctgctgctcagacaaggtactccttcctctgaaccccggcggctggct
tccctcggcagcctgttggatgatcagcattggcaccatttagcattggagcggcgcagc
tctcacctcaacctcactgtggacaaacacatgcagaggattcaaatccctgcagagttc
aacagctgggacatcgagcagctgagtgtagggacagtccagagccgaggctctaataaa
ccagtcgtcttcaagaggaactttcacggctgcctggaaaacctgctgtacaacggcctc
aacctgatagagttagctaaacacaaagatctcaaagtcacagtaatgggcaatgtgacc
ttttcttgtgctgagtcggtttccgtcgccgtgacgttccccggcccccagagcttcctc
cagttgccgggggcgactgcgtcctcgtctgggggtttgtccgttgggtttgagttcagg
acgtggaacaaggcggggcttctgctcacctttgacctgcctcaggaagggggcgtggtc
tggctgtacctgagcgaggccagactccggatacagatccataaagccggcagagcgctg
ctggagctcagtgcaggttccgctctgaatgacggtcagtggcattcggtggagctgaac
tccagacgaggtcgtctgagcatcactgtggataaagaggaaggaggcagcgcccaagcc
agtcactcatttcctgtcaccgtagacggtcacctcttctttggtggttgtcctgttgaa
gacgacaagctgaagtgcagaaacccctttaatgtcttccagggctgcatgcgtctccta
actctggacaaccaaatcgtggacctgatattagtgcagcaaaagcagctgggaatctac
agcaacctgcagatcgacatgtgtggaatcatcgacaggtgttctcccagtcgttgtgaa
catggcggtcgctgcagtcagtcctggaccgtcttccactgtaactgctcaggaaggggc
tacagcggagcgacctgccacagctctgtgtacgaacagtcctgcgaggcgtacaaacac
aacggcaacacgtcgggacatttttacatcgacgtggacggcagcgggccaatcagaccg
cagctggtctactgcaacatgacagaggagaacacctggatggtgctccagcacaacaac
tcagagctcaccagcctccgaccgtctcctggtgtagaccagcactcggttcactttgac
tactccactgaagaggagcagctattggccgtcatcagccaatcggaacactgcgaacag
gagctgtcctaccactgcaggaagtcccgcctcctcaacactccagagggctctccgttc
agctggtggctcggtggtcccggtcccggtcgagtccagtcttattggggcggagctcag
ccgggcagccagcagtgtgtctgcggcctgcagggcgactgtgtggacccacagcactac
tgcaactgtgacgccgaccgcgtggagtgggcagaagactcgggcctgctcacccacatg
gagagcctccccgtcaggtctctggtgctgggtgacatccagaggccggagtcagaggcc
gcctacagggtggggccgctccgttgtcatggagacaagaacttctggaacgctgcgttt
ttcgacaaggagacgtcgtacctccacttccccaccttccacggagagctgagcgcagac
atctccttcatgtttaaaaccacggcctcctccggtgtgttcctggaaaacctgggcatc
aaagacttcatccgcatcgaactgagctcctccactcgggtggttttctccttcgacgtt
ggtaacggaccgttggaggttcacgtggaatcgagcgtccccctgaacgacaaccggtgg
catcgagtccgagccgagcggaacgtcaaggaggcgtcgctgcgattggatgaacttcct
gtcgccacacaggaggctcctacagacggacacctccacctgcagctcaacagccagctg
ttcataggaggcacggcgtccaggcagaagggctttcggggatgtattcgctccctgcag
ctgaacggcgtcaccctggacctggaggagagggcgaggatcacgccgggggttcgaccc
ggctgcccgggtcactgcagcagctacggctcgctctgccagaaccagggccgctgtgtg
gagagagccaacggcttccactgtgactgcagcctgtcagcgtacaccggagtcttctgc
catacagaggtctcggccagcttcaaatctgggacgtccgtcagctacaccttcaaagag
ccgtacgagttaagccgtaacatcagcgccctgccgtcctccatctactctgacatgacg
ctgagaggagagaacatctccctgagcttcaggaccaaccagagtccggctctgctgctc
tacgtcagctcctactacagagagtccctggccctgctcatcaacaagcacgataagctg
gaggtgagatacaagctggacagcagcagagatgctgaagtgttgaggagcagagtgaag
agcctggcggacggacatctacacaccgtctccatcaggagactgacagactctgtgtct
ctgcagattgaccaaaatcccagagaggacttcaacctgacatctgatggagagttcaac
gccatcaagtcgctggtgttgggcagagtgcatgggtccgatgatttggacacagacctg
tccaggttggcgtctctcggtttcaccggttgtctctctgtggtccgctttaactccatc
agccctctgaaagctgctctgctccacccacacaccagccccgtcatcatctctggacct
ttagtccagtccaactgcggctcctcggcttcggccaatccctacgcagcagagaacaca
caccacctttcagaccagtctggttcagtgggttcaggtcagcctttagtcaatgccatc
aggactgactctgctctgattggaggtgtcatagcagtggtgatctttgtgattttgacc
ggcctggcgataaccgccagattcctctaccgcagaaaagagacttatagaaaccaggaa
gtgaagggagtcaagcaggaggacagccaagatttccctttcaacaaccagacggactcc
cagaacgtctccactgaaaacccaaaggagtattttatctaa
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