Anoplopoma fimbria (sablefish): 129088942
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Entry
129088942 CDS
T09102
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
afb04517
IgSF CAM signaling
afb04520
Adherens junction
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129088942
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129088942
09144 Cellular community - eukaryotes
04520 Adherens junction
129088942
04530 Tight junction
129088942
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129088942
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129088942
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129088942
NCBI-ProteinID:
XP_054452196
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All DBs
Position
3:complement(1440943..1678176)
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AA seq
1417 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGSIKVRSLIQQAALRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLIALYDEQEPHHGGDGTSASSTGTQSPDLFAVDLSAGSGASAFQPY
QVTSEIEVTPSALRTNMPLHVRRSSDPALMTINGPFGGGEPRVQTEEPPSRKNPTRWSTT
AGFLKARHSSGTNSLERKGKDTDTYRSLPRDAGTWANQVEFQRETARSSLSANHPMVDRW
LERQEQEDEAREEENGRIEPVGRADSCMDHAPVRSLEDIIKLVEVSNDGGPLGIHVVPFS
GRDRRTLGLLVKRLEKGGKADQQGLFQENDCIVCINNGDLRNIRFEQAQNMFRQAMRSPV
IMFHVVPSSMKGHYEQLSHAMYASGRFSPDSLSGSTVSGVDQAPHRMSRHGSQTHPHSHP
HPQPHAHQDQTDGYLPLPHPAVSAAKPPTGHTPSPQRAPNATPTGGFTKKVGRRLNIQLK
KGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRTQE
EVVSLLRATPMGGAVGLLVLRQEDTFLPRDVNAEPQMQSPRDVHPRQPATAVKPHWLIEK
PEEDELVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAA
CKDGRLRVNDQLIAVNGESLLGKTNQDAMETLRKSMSTEGNKRGMIQLIVARRVSKRNEE
TPGSPLGGSQQTINTSLDDHERRISHSLYGGLEGLDDNLMPRQGMIPRTIGNYQLSPTVN
MPQDDTVIIEDDRPPLLPPNLSDQSSSSSHDDVGFTADVTPPWAKEPPTQNDSPPSSSVI
PDENNPDGSFQREGFGRQSMSEKRTKQFGDASQLDILKTRKSKSMDLVADEINLTHRPEN
NAGSSTKDVGPSLGLKKSSSLESLQTAVAEVTLNGDLPFHRPRPRIIRGRGCNESFRAAI
DKSYDRPAATEEDDEGMETLEEDTEESSRSGRDSVSTVADQTPLSGTNEKPLVNGTNRTK
EEKKKDKDKGGKEKKKQQEGGKEKDKGKAKKGMLKGLGDMFRFGKYRKDERPGEKLDRKG
SSKWRGEETQVSDEETMKMRMEQERIQAKTRELRERQARERDYAEILDISHTPERASEEE
HPYAGINPLNISVDSGHSRPHSPRDEYPHLHPHHQHSDTLYTQVSKARNERPPSADSSRL
APSNHDRIQRLRHEFQQATTVPDDSDDRRRTYSFEQPWSNTSSNGQSGYSQPGRHSVSVE
VQMQRQRQEERDSFAQAQRQYSSLPRQPRKNPSSISQDSWDKAYPPGEVFQTAKDNPRYS
SYQGSRNGYPGGGGVNARVLLEAQELLRQEQRRREQEAKGKLMQESIGNNSYEGYPTARL
KDPASPKGPYRHDVPPSPSQLARLNRIGSEKGRLFYS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactgtgtgcttcggcaggacgagggtggtggtgccgtgcggggatgggagc
attaaggtccgatccctcatccagcaggctgccctgcgctacaagaaggccatcgccaag
gatgctagctactggctgcaggtccaccggttggagcacggcgacggcggcatcctcgac
ctggacgacgtactctgtgatgtggccgacgacaaagaccggctcatagccctgtatgac
gaacaggagccccatcatggaggcgacggtaccagtgccagctccacggggacccagagc
ccggacctgttcgccgtggacctcagcgccggcagcggggcctcggccttccagccctac
caggtcaccagtgagatcgaggtcacgccctccgccctgcgcaccaacatgcccctccac
gtccggcgcagcagcgaccccgccctgatgaccatcaacgggccgttcggcggcggcgag
ccgagggtccaaacggaagagccgccgtccaggaagaacccgacccgctggtccaccaca
gctggcttcctgaaagctcgccactcctccggcaccaacagcctcgagaggaagggtaaa
gataccgacacgtaccgcagtctgccgcgggatgcagggacgtgggccaatcaggtggag
tttcagagagagaccgcccgctcgtcactcagcgccaatcaccccatggtggaccgctgg
ctggagagacaggaacaggaggacgaggccagagaagaagaaaacggccggatcgagccg
gttggtcgagccgactcctgcatggaccacgcccccgtgaggtcactagaagacataatc
aaactggtggaggtgtcaaacgacggtgggcccctgggaatccacgtggtgcctttcagt
ggcagggaccgcaggactcttggcttgttggtcaagcgtctggagaagggaggcaaggcc
gaccagcagggcctcttccaggagaacgactgcatcgtctgtatcaataacggagacctg
cggaacatccgcttcgaacaagcccagaacatgttccgccaggccatgcgctccccggtc
atcatgttccatgtggttccgtcgtcgatgaagggccactacgagcagctgtcccacgcc
atgtatgcctcgggccgcttcagcccggactccctgagcggcagcacggtctccggcgtg
gaccaggcgccccacaggatgtcccgacacgggtcccaaactcacccgcactcccatccc
catccccaaccgcacgctcaccaagaccagaccgacggctaccttccactgcctcacccg
gcggtctctgcagccaagccgcccacgggacacaccccctcgcctcagagggcgcccaac
gccacgcccacgggaggatttaccaagaaagtcgggaggaggctcaacatccagctaaag
aaaggtccagagggactcggcttcagtatcacatcccgggacgttcccatcggcggctcg
gcgcccatctacgtgaagaacattctgccacggggagctgccatccaagatggccgcctc
aaggcaggagacaggttgctggaggtgaatggcgtggacctgaacgggcggacccaggag
gaggtggtgtctctgctccgggccacgcccatgggcggagccgtggggctgctggtccta
cggcaggaggacactttcctccccagagacgtgaatgctgagccccagatgcaaagcccc
agagatgtgcatccgaggcagcccgcgacagccgtgaagccccattggctgattgagaag
ccagaggaggacgagttggtcctgactccagacggcaccagggagttcctgacctttgag
atccccctgagtgactcgggttcagctgggctgggagtcagcgtcaaaggcaaccgctcc
aaggagaaccacgctgacctgggcatcttcgtcaaatccatcatcaacggaggggcggcc
tgcaaggacgggcggcttcgagttaacgaccagttgatcgctgtcaatggagagtcgcta
ttgggtaaaaccaaccaggacgccatggagacgctacgcaagtccatgtcaacggaaggc
aacaagcgtgggatgatccagctcattgtggcgagacgagtgtctaaaagaaatgaggag
acaccgggcagtccgctggggggcagtcagcagaccatcaacacctccctggacgaccac
gagcgccggatctcccactccttgtacggtggcctggagggcctcgatgacaacttgatg
ccacgacaaggaatgatcccgcgcacaataggaaactatcagctgtcaccgaccgtcaac
atgccgcaggacgacacggtgatcatcgaggacgaccggcctccgctcctcccgcccaac
ctctccgaccaatcatcgtccagctcccacgacgacgtgggcttcaccgccgacgtgacg
ccgccgtgggccaaagagccgcccacgcagaatgacagccctccttccagctccgtcatt
ccagatgaaaataatccagacggctctttccaaagggaaggcttcgggcgccagagcatg
tcggagaaacgcaccaagcagttcggagacgcctcgcagctcgacatcctcaagacacgc
aaatccaagagcatggatctagtagccgacgagattaacctcacccatcggcccgagaac
aacgcaggttcttccacaaaggatgtgggaccatcactaggcttgaagaagtccagctcg
ctcgagagcctccagacggctgttgccgaggtaaccctcaacggggacctccccttccac
aggccacgccctcgcatcatcagggggcggggctgcaatgagagcttcagagcggccatc
gacaaatcctacgaccgaccagcagcaacggaagaagacgacgagggcatggagacgttg
gaggaggacacagaggagagttcacgatcgggtagagactcggtgtccacggtggccgac
cagacgccgctgtccggcaccaacgagaaaccgctggtcaacggcacaaatcgaaccaaa
gaggagaagaagaaagacaaagacaagggagggaaggagaagaagaaacagcaggaggga
gggaaggagaaagacaaggggaaagccaagaagggcatgctgaaaggactcggggacatg
ttcaggtttgggaagtaccgtaaggacgagcggccgggagaaaagctggatcgtaaaggc
tccagcaagtggaggggggaggagacgcaggtttccgatgaggagacgatgaagatgagg
atggagcaggagaggatccaggctaagaccagagagctgagggagcgccaggccagggag
cgggactacgccgagatcctggacataagccacacaccggagagggcctccgaggaggag
cacccctacgcaggcatcaacccgctgaacatctccgtggacagcgggcacagccggccc
cacagcccccgggacgaatacccccacctccatccacaccaccagcactccgacaccctc
tacacccaagtcagcaaggcccgcaacgagcggcctccgtctgcagacagtagccggcta
gcacctagcaaccacgaccggatacagaggctgaggcacgagttccagcaggcgaccacc
gtcccggacgactccgacgaccgcaggaggacctacagcttcgagcagccctggtcaaac
accagcagcaacggtcagagcggctacagccagccgggtcgccactcggtgtcggtggag
gtccagatgcaacggcagagacaggaggagagagactcgttcgcccaggcacagcggcag
tacagctccctgccacggcaaccgagaaagaaccccagctccatctcccaggactcgtgg
gacaaggcgtacccacctggcgaggtcttccagacggcaaaggacaaccccaggtactcc
agctaccagggctccaggaacggctacccgggcggcggcggggtcaacgccagggtcctt
ctggaggcccaggagctgctgaggcaggagcagaggcggcgagagcaggaagccaaaggg
aagctgatgcaggagagcatcggtaacaacagctacgagggataccctacggcgcgcctg
aaggacccggcctcccccaagggtccgtaccgccatgatgtgccgccgtcgccttcgcag
ttagcgaggcttaatagaatcgggtcggagaaaggaagacttttttattcttga
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