Anoplopoma fimbria (sablefish): 129088958
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Entry
129088958 CDS
T09102
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129088958
04121 Ubiquitin system [BR:
afb04121
]
129088958
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129088958
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129088958
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129088958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
DUF8608
zf-RING_16
HypA
FAR1_N
Zn_ribbon_PaaD
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
129088958
NCBI-ProteinID:
XP_054452219
LinkDB
All DBs
Position
3:complement(24806276..24812035)
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSAEISPRLPDYTCPRCDSGFIEELSEEGSTENGSVSTSSTGDHN
RPAFENMDHQHLFTFPSGYGPFALGIFDENFDLRTRLPTEDNRETENRREREMASRQRYG
ARQPRGRHVPRRQGTRHEGVPTLEGIIQQLVNGIIAPTAMPNMGIGPWGMLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRERIKSLPTVTITEEHVGAGLECPVCKEDYSVEEN
VRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSPS
SPSNENAARNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctccaccacggccctgccggtttttctgtcaccggtgttcagcagagatt
agtccgcgtttaccggactacacctgtccacgctgtgattccggttttattgaggaactg
tctgaggaaggaagtactgaaaatgggtccgtatccacgtcctccaccggtgatcataac
cgaccagcctttgagaacatggatcaccaacacttgttcacatttccctctgggtacggt
ccgtttgcccttgggatttttgatgagaacttcgaccttcgaacgcggctacccacagaa
gacaaccgcgagacagaaaacaggagagaaagggaaatggcatcacgacaacgatacggt
gcacggcaaccccggggtcgacatgttcctcgacgacagggtacgcgccatgaaggagtg
cccacattagagggaattatccagcagttagtaaatggaatcatagcgcctacagccatg
ccaaatatggggattggaccatggggtatgctacattccaatccaatggactacgcctgg
ggtgccaatggtcttgatgctatcattacacagttattgaaccagtttgaaaacacgggt
ccgcctcctgcagacagagaaaggattaagagtttacccaccgttactattacagaagaa
catgtgggtgctggtttagagtgtcctgtgtgcaaagaagactacagcgttgaggagaat
gttagacaactgccatgcaatcatttgtttcacaatgactgtatagttccatggctggaa
cagcacgatacgtgtcctgtgtgcaggaagagtctaagcggacagaacacagccacagac
ccaccagggctatcgggaatgaacttctctccctcgtcctcatcctcttcctcccccagc
tcacctagcaatgaaaatgctgccagaaactcatag
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