Anoplopoma fimbria (sablefish): 129088974
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Entry
129088974 CDS
T09102
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129088974 (rabgef1l)
04137 Mitophagy - animal
129088974 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129088974 (rabgef1l)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129088974 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
129088974 (rabgef1l)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
129088974
NCBI-ProteinID:
XP_054452287
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All DBs
Position
1
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AA seq
505 aa
AA seq
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MTSQRRGIHLDQSELLCKKGCGFYGNTGMLGLCSKCWREENQREKQKQIQEDWALAERLQ
KEEEEAYASRHQKAPSQSTITPFNKFEERKTKEKSSKVHTVTKFFTPSTKTPSKKATPFE
AQSSPSPSSSASRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTESMVYKRDMGADE
LSECVQDFYQNLSDRLHTQFKGSSEHVESVMDEVERYMMTRLYKEVFCPETTDDEKKDLA
IQKRIRALHWVTIEMLCVPVDEEIAEASDSVVKAITDVIEMDSKRVPKEKLACITRCSKH
IFNAIKISKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFSNPSRLMTGEDGYYFT
NLCCAVAFIEKLDGQSLNLSSEEFELYMSGQASPQWPQSTGASSCSPGSSTLSQVDKRLD
LLAGLGERQDQVMEKARQLESDLIDWTDEVEQKVQSVLESFPPETQNPSAATASGTTSAA
SSAIDSDNVENEHLPPPLQPQVFAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccagcggcgtgggatccatctggaccaatcagagctgctttgcaaaaaagga
tgtggtttttatggcaacactggcatgctgggcctgtgctctaagtgctggcgagaggaa
aatcagcgagaaaagcaaaaacagattcaagaggactgggcacttgctgagaggctgcag
aaagaggaagaggaagcctatgcaagcagacatcagaaggccccatcacagtctaccatc
acacccttcaacaagtttgaggaaagaaaaactaaggaaaagtccagcaaagtccacaca
gtcacaaagttttttactccctccacaaaaacaccatcaaaaaaagctactccttttgaa
gctcagtccagcccaagccccagctcctctgcaagccgtcattcctcggtggacagtgac
catgcaacgagagagttcattgattttctcaagcccctgaagtctggcagggagatcttc
aaacagtgccgggccttcactgagagcatggtctataagcgggacatgggtgctgatgag
ctgtcagagtgtgtgcaggacttctaccagaatctctcagaccgcctccacacccagttc
aaaggttcctcagaacatgtagagagcgttatggatgaagtagaaaggtacatgatgact
cgtctctacaaggaagtgttctgtcctgagaccacagacgatgagaagaaagacctggcc
attcagaagagaatcagagccttgcattgggtcaccattgagatgctgtgtgttcctgta
gatgaggagatcgctgaggcgtcagacagtgtagtcaaagccatcacagatgtaattgaa
atggattcaaagcgtgtgcccaaggagaagctggcgtgcatcactcgttgcagcaagcac
atcttcaacgccatcaaaatcagcaaaaaagaggctgcatctgcagatgacttcctcccg
acactcatctacattgtgctgaaagcaaacccaccgcgactgcagtccaacatccagtac
atcacccgcttcagcaaccccagcagactaatgactggagaggatggttactacttcact
aatctgtgctgtgcagtggccttcattgagaagctggacggtcagtctctgaacctaagc
tctgaggagtttgagctctacatgtccggccaggcatccccccaatggccacagtccacc
ggagcttcttcctgctccccaggcagctcgactctcagtcaggtcgacaaacggctggac
ctgctggcagggctcggagaaaggcaggaccaggtcatggagaaggctcgccagctggag
agcgacctcatagactggacggacgaggtggagcagaaggtgcagagcgttctggagagc
tttccaccagagacgcaaaacccgtctgcagccacagctagtgggacaacgtctgcagca
tcatcagcaatcgactctgataacgttgagaatgagcacctgcccccacctctgcaaccg
caagtgtttgctggttga
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