Anoplopoma fimbria (sablefish): 129089005
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Entry
129089005 CDS
T09102
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129089005 (pif1)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129089005 (pif1)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129089005 (pif1)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129089005 (pif1)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
129089005 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
DEAD
RsgA_GTPase
AAA_7
AAA_16
ABC_tran
PhoH
AAA_5
AAA_24
Motif
Other DBs
NCBI-GeneID:
129089005
NCBI-ProteinID:
XP_054452290
LinkDB
All DBs
Position
3:complement(22942973..22950041)
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AA seq
632 aa
AA seq
DB search
MLDQEDGAQLQCCVAVEQLNSSGQATRRQVIRKASVILGRNEFQDIILRVHDGKVPQNYH
LKEFKLFTKFAREGKCTVKLLPENIQVLISNCPPDRLNLFLKTLSIKHQARLSSKPMTDR
EKLKAGLPRSFEAISPLQPKDIQKVNELRSKAAPQGLTDRTNKTVAGTGQQVKRSRSDTN
FSPVKANPSKKPILSLPSRKLNKEQAAVLSAVLSGKNIFFTGSAGTGKSFLLKRIMGSLP
PKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLIID
EVSMVEAQFFDKLESVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQARSW
RKVIRINMELMEVRRQTDQSFISLLQAVRVGRVTEEVTAKLIESAYHHIERDGILATRLC
THKDDVELTNENKLQQLPGSARVFEALDSDPTLVKTIDAHSPVSRLIQLKVGAQVMLTKN
LDVARGLVNGARGVVVAFESGKHGLPRVRFLCGATEVLKPERWVFKSSGGIHLIRQQLPL
KLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRADPD
VLVFYKKLRKERLLMQASMDDFLGNRNKENSW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgttagaccaggaggacggggcccagctgcagtgctgtgtggcggtggagcagctcaac
tcctccggtcaggccacccggaggcaggtcatccgaaaagcctctgttattctgggccgg
aatgagttccaggacattatcctgcgggtccacgacggaaaagtcccgcagaattaccat
ctcaaagaattcaagctctttacaaaatttgcaagggaaggaaagtgcactgttaaattg
ctccctgaaaacatccaggtgctcatctccaactgcccccctgaccggctgaacctcttc
ctcaaaaccctgagcatcaaacaccaggcccggctgagcagcaagcccatgaccgaccga
gagaagctcaaagccggtctgccccgcagcttcgaggccatcagccccctgcagccaaag
gatatccagaaggtcaatgagctgaggagtaaagcagcaccccaagggctgacagaccgc
accaataagactgtagcaggaactggacagcaggtcaaaaggtcgagaagtgacactaac
ttcagcccagtgaaagccaacccgagcaaaaagcccatcctgtctctgccatcacgtaag
ctgaataaagaacaggctgctgtcctctctgctgtgctgagtggcaagaacatatttttc
actggaagtgcaggtacaggaaagtcgtttttactgaagagaattatgggatctcttcct
ccaaagagcacatttgccacagccagcacaggagtggctgcatgtcacattggaggaacg
acgttacacaactttgctggtattggctccggctctgccccactggagcagtgtatcgag
ctggcacagaggcccggggtgctgcagcactggaccagctgtcgacacctcatcatcgat
gaggtctccatggtggaggcccagttctttgataagctcgagtcagtggcaaggtcggtg
aggaggtccactgagccgtttggaggcatccagctgattgtatgtggcgacttcctccag
cttcctcccgtttctaagggaaaggaaaaggccagcttctgcttccaggccaggagttgg
cgtaaggtcatccggatcaacatggagctaatggaagtgcggaggcaaactgaccagtcc
ttcatctccctcctgcaggcagtgagggtgggcagggtgacggaggaagtcactgctaag
ctgatagagagtgcctaccatcacattgagagggacggcattctagcgaccaggctgtgc
acacacaaggacgatgtggagctcacaaacgagaacaaactccagcagctgccaggttca
gctcgtgtgtttgaggcactggacagcgacccaactctggtgaagacgatagacgctcac
agccccgtcagcagactgatccaactcaaagttggagctcaggtcatgcttactaagaac
ctggatgttgctcgtggtctggtgaacggagcccgaggggttgtggtggcttttgagtct
ggaaaacatggactcccacgggtgcgtttcctgtgtggtgccacagaggttctgaagcct
gagcgctgggtgtttaagtccagcggtgggatccacctgattcgacagcagctgccactc
aaactggcctgggccatttccatccacaagagccagggaatgacactcgactgtgtggaa
atctctctggcacgtgtgtttgagagcggccaggcctacgtggccttgtctcgggctcgg
agcctggagggtctgcgggtgatggactttgacccccgtgtggtcagggcagatccagat
gttcttgttttctacaagaaactgaggaaagagaggctgctcatgcaggcctcaatggat
gattttcttggcaacagaaataaagaaaactcttggtga
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