Anoplopoma fimbria (sablefish): 129089012
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Entry
129089012 CDS
T09102
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129089012
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129089012
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
129089012
NCBI-ProteinID:
XP_054452300
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All DBs
Position
3:22601335..22602027
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AA seq
230 aa
AA seq
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MAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKSLLKRDRFVYPSLLGDASEHLKGFSMDSFLVPGDKT
RAFLSPVSSSSSFSLLEPVAQFSSGAVHPHTLPYGTHTFGYQTGGMMGGLACHGQHTHTH
PSPSGPGYVVPCNCGAWSAASLQPQVAYILFPGGMPKSSMDSYTSPSSSV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctttagatcacatcaaaagacccatgaatgctttcatggtgtggtccaga
ggccagaggaggaaaatggcccaggaaaacccaaagatgcacaactctgaaatcagcaag
aggctcggcgcggagtggaagctgctgtccgactccgagaagcgtccgtacatcgacgag
gccaagaggctgcgagctcagcacatgaaggagcatccggactacaagtacagaccccgg
cgtaaacccaagagtctcctgaagagggaccgctttgtttacccgtctctactcggggac
gcctcggagcacttgaaggggttttccatggactcctttctggtccccggggataaaacc
agagccttcctctctccagtctcctcctcttcttccttctccttgctggagccggtggcg
cagttcagctccggagccgtccatccgcacacgctgccctacgggacgcacacgtttggg
taccagactggagggatgatggggggtctggcctgccacggacagcacacccacactcac
ccgtcaccctccggcccgggatacgtggttccgtgtaactgtggtgcctggtctgctgcc
agcttgcagcctcaggtagcctacatcctcttccccggagggatgcccaagagcagcatg
gactcgtacacttcacccagctccagtgtgtga
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