Anoplopoma fimbria (sablefish): 129089038
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Entry
129089038 CDS
T09102
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03420
Nucleotide excision repair
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129089038 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
129089038 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
afb03051
]
129089038 (rad23ab)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129089038 (rad23ab)
Proteasome [BR:
afb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
129089038 (rad23ab)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
129089038 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Crinkler
UBA_3
Rad60-SLD_2
CUE
Dsc3_N
Ubiquitin_2
DUF1421
UBA_2
Motif
Other DBs
NCBI-GeneID:
129089038
NCBI-ProteinID:
XP_054452334
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All DBs
Position
3:complement(9715718..9732879)
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AA seq
471 aa
AA seq
DB search
MLTVTLKTLQQQTFKIEIDPELTVNALKEKIEKDRGKDAFPAAGQKLIYAGKILNDDTPL
KEYKIDEKNFVVVMVTKPKPAPPPQAAPQPTPPPPAAPAPPSTQVPSTATHAVSAPTPAL
QSIPGSESTSPVPDHTPVGSVEAAAAAALDSNSPTDSAPDSAPDPAPASASAATPASAPA
PAPEAAQTAPAPADPPTPTTQPEEKPRDDPENEPSATSEVLSTAASLVEELGLLEEAASI
LVTGPAYENLVSEIMSMGYEREQVVAALRASYNNPDRAVEYLLTGIPVETSDPPPQEPVG
PRAPPNPVAPATQEPRQPPATSNTGPAPGSQPPPAGGVSVSAGNPLEFLRNQPQFQQMRQ
IIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPRGGDTAGEGAEAQGTPQTN
YIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQSWDDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttgacggtaacactgaagaccctccagcagcagacattcaaaatagaaatagaccca
gaattgacggtgaatgccctgaaggagaaaatagagaaggacagaggaaaagatgcattt
cctgctgcaggacaaaaactaatctatgcaggcaaaatcttaaacgatgacaccccgctg
aaggagtacaaaatcgatgagaagaactttgtcgtggtcatggttaccaagcctaaacca
gcccctcctcctcaagcagccccacagccaacgccccctccgcctgcagctccagcacca
ccctcaacacaagtgccctccacagcgacccacgcagtgtctgcacccacgcctgcccta
cagtctatccctggctctgaatccacatccccagtcccagaccacacacctgttggttct
gtcgaagcagcagcagcagcagcccttgactcgaactcccccacagactctgccccggac
tcagccccagacccggccccagcctcggcttcagctgccactccggcatctgcgccggcc
ccagctcccgaggctgcgcagacggccccggcccccgcggaccccccaacccctaccacc
cagccagaagaaaagccgagggatgaccccgagaacgaaccatctgctacttcagaagtc
ctttccactgctgccagcctcgtcgaagaactgggtctccttgaagaggcagcgtctatt
ctggtgacgggtccagcctatgagaacctggtgtcagagatcatgtctatgggttacgag
cgggagcaggtagtggccgcgctcagagccagctacaacaacccagaccgagcagtggag
tacctactcacgggtattccagtggagaccagtgatccaccacctcaggagccagttgga
cccagagctccgcccaaccccgtcgcccctgctacacaagaaccacgacagcccccagca
acctcaaacacagggccagcgcccggcagtcagcctccccctgctggtggagtctccgtc
tcagcagggaaccctctggagttcttgaggaaccagcctcagttccagcagatgagacag
atcatccagcagaacccggcccttctaccggcccttctgcagcagctgggcagagacaac
ccgcagctgctgcagcaaatcacgcagcaccaggagcgttttgtgcagatgcttaatgag
ccacgaggtggagacactgcaggggagggggccgaggcccagggaaccccacagacaaac
tacatccaggtcaccccacaggagaaggaggccattgagaggttaaaagcgctgggcttc
cctgaagggttagtcatccaggcctacttcgcctgcgagaagaacgagaacctagctgct
aacttcctgctgcagcaatcatgggacgacgagtag
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