Anoplopoma fimbria (sablefish): 129089042
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Entry
129089042 CDS
T09102
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03030
DNA replication
afb03410
Base excision repair
afb03420
Nucleotide excision repair
afb03430
Mismatch repair
afb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129089042 (pold3)
03410 Base excision repair
129089042 (pold3)
03420 Nucleotide excision repair
129089042 (pold3)
03430 Mismatch repair
129089042 (pold3)
03440 Homologous recombination
129089042 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129089042 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129089042 (pold3)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129089042 (pold3)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129089042 (pold3)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129089042 (pold3)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129089042 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
129089042 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
129089042
NCBI-ProteinID:
XP_054452339
LinkDB
All DBs
Position
3:complement(4429126..4434722)
Genome browser
AA seq
444 aa
AA seq
DB search
MDELYLDNIDEYVHDQDKIVTYKWLSLTLGVHVNTAKQMLYHYLDHKRKESSAQLHATYL
VSGKFVDNGQTSHKVSVVKEDQLEDFKSKMSLLVSVHVYSIQKALLKDSGPLYSVDYDAV
KDNMQNCSRYSAIRCASAVPMELQETREIQRSPTPEPANKKPAMNGEANLASKPSSKAQK
GIMGMFANKSAPKNQDGGKDVKSEQKEDAPVVDVPKSKPETKANPMMNFFGSQAAKKAEK
TVKKEEEAAQSSSSAEQRHQTSQPEEKKAAAAAVELPKESKEDSRSKTKRLKDSDSEEEK
MDKKKRRRIKKPEPDSSDEDVIPDSPQQMETREASPSPKKKVEPVPHSHQGNFEMKMRKR
RRVLKSRTFLDDEGCIVTEKGYESESYSETEDDVQAAKQAPKHPVPAKLPSSTKQDEKKS
QKKTSANANKGSKQASIMGFFQKK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctttatctggacaacatcgacgaatatgtccacgaccaggataagatagtg
acctataaatggctgagtctcactctgggagtccatgtcaacacagccaaacaaatgctc
taccattatttggatcacaagaggaaggaaagttcagcccagctccatgccacctacctc
gtgtcggggaagtttgtggacaatggacaaacgagtcacaaggtgtcagttgtcaaagag
gatcagttggaagatttcaaatccaaaatgagcttgctagtcagtgtccatgtctacagc
atccagaaagctctcctcaaagacagcggccccctctacagcgttgactatgatgccgtg
aaagacaatatgcagaactgcagcagatacagtgcgatccgctgtgccagtgcggtgccc
atggagctgcaggagacgagagaaatccagcgttctccgacaccagagcctgcaaacaaa
aaacctgccatgaatggagaggccaatctggcttcaaaaccttcctccaaggcgcagaaa
ggcatcatgggaatgtttgcaaataagtccgctcctaagaaccaggatggtggcaaagac
gtcaagtcggagcagaaggaggatgcacctgtggtcgatgtccccaaaagcaaacctgaa
acaaaagccaatcctatgatgaacttctttgggagtcaagcagcaaagaaagcagaaaaa
acagtgaagaaggaggaggaagcagctcagtcatcatcctcagcagagcagcgacatcag
acttcacagcctgaagaaaagaaagctgctgctgctgcagtggagctgcctaaagaatcc
aaggaagactccaggagcaaaaccaagagactcaaggattctgacagcgaagaggagaaa
atggacaagaaaaagagacgaaggataaaaaagcctgaaccagacagcagcgatgaagat
gtcattccagattctccacagcagatggaaacaagagaagcatcaccaagtccaaagaag
aaggtggagcctgttcctcattcacatcaggggaactttgaaatgaagatgagaaagaga
agacgagtcctgaaatctcggacgtttttagatgatgaaggatgcatcgtgacagagaaa
ggctatgagagcgaatcgtactctgaaacagaagacgacgttcaggccgctaaacaagct
ccaaaacatcccgtccctgcaaaactaccatcaagtaccaaacaggacgagaagaaaagt
cagaagaaaacgtctgcaaatgcaaacaaaggatccaaacaagcttcgattatgggattt
ttccaaaagaaatga
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