KEGG   Anoplopoma fimbria (sablefish): 129089074
Entry
129089074         CDS       T09102                                 
Name
(RefSeq) transcription factor HES-1-like
  KO
K06054  hairy and enhancer of split 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03460  Fanconi anemia pathway
afb04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    129089074
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    129089074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afb03000]
    129089074
   03400 DNA repair and recombination proteins [BR:afb03400]
    129089074
Transcription factors [BR:afb03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    129089074
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     129089074
SSDB
Motif
Pfam: Hairy_orange HLH bHLH_NCOA
Other DBs
NCBI-GeneID: 129089074
NCBI-ProteinID: XP_054452387
LinkDB
Position
3:complement(22481489..22483044)
AA seq 242 aa
MPAGTLERTSPTAASEDCKPEKPRSVTENRKSSKPIMEKRRRARINESLGQLKTLILVAL
KKDSSRHSKLEKADILEMTVKHLRNLQRLQMTAAVNTDPSVLGKYRAGFSECVGEVTRFL
STCEGVNTDVRTRLLSHLASCVTQINAVNFYTPHPGALGLGQTGAQIQAASAPQMPCKSG
SSMHASPEAMKVFGGFQVVPTADGQFAFLVPSASLVPLGAQNSHHMSPVAPRVTLDSVWR
PW
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccagccggtactttagagaggacgtctcccaccgccgcaagtgaggactgcaaaccc
gaaaaaccccggagtgtcacagagaacagaaagtcctccaaaccaatcatggagaagcgg
agacgtgctcgcatcaatgagagtctgggccagctgaagactctcatcctggtcgcactc
aagaaagatagctccagacactccaaactggagaaagcggatatccttgagatgactgtg
aagcacctcaggaacttgcagcgacttcagatgaccgctgctgtgaacacagacccatcc
gtcctgggtaaatacagagccgggttcagcgagtgtgtgggagaggtcacccgtttcctc
tccacatgcgaaggggtgaacacagacgtgaggactcgtcttctcagccacctggcatcc
tgcgtgacccaaatcaacgctgtgaacttctacacacctcacccaggtgccttgggactc
ggacagacaggtgcacagattcaagctgcctctgctccacagatgccttgcaaaagtggc
tcatcaatgcacgcttcccccgaagcgatgaaggtgttcgggggcttccaggtggtgcca
acagcggatggacagtttgcttttcttgttcccagcgcatctctcgtgcctcttggggca
caaaacagccatcacatgtcacctgttgcgcctcgggtcaccttagactctgtgtggaga
ccatggtag

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