Anoplopoma fimbria (sablefish): 129089155
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Entry
129089155 CDS
T09102
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03272
Virion - Hepatitis viruses
afb04382
Cornified envelope formation
afb04514
Cell adhesion molecule (CAM) interaction
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129089155 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129089155 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129089155 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129089155 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129089155 (cldn1)
04147 Exosome [BR:
afb04147
]
129089155 (cldn1)
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129089155 (cldn1)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
129089155 (cldn1)
Exosomal proteins of colorectal cancer cells
129089155 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
DUF6479
DUF202
Motif
Other DBs
NCBI-GeneID:
129089155
NCBI-ProteinID:
XP_054452508
LinkDB
All DBs
Position
3:complement(22467293..22470215)
Genome browser
AA seq
211 aa
AA seq
DB search
MANSGIQLLGFTLAFLGFIGSIASTVMVEWKASSYAGDNIITAQSMFEGLWKTCASQSTG
QVQCKVYDSLLQLPGIVQGTRGLMLSSIMLSFISILVELVGMRCTTCMADQPEQKDKVAL
VGGVIFIIAGLLALVGTSWYGHRIAAEFYDPFTPTNSRYEFGSALFVGWGAACLIIIGGS
FLCCNCSSKGSGKSPRYPASSSAGQPGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcaggtatacagcttcttgggttcacgttggccttcctgggcttcattggt
tcgatagcatccacagtaatggtggaatggaaagcctcgtcttatgcaggagacaacatc
atcacagctcagtcgatgtttgaagggctttggaagacctgtgcatcacagagcaccggt
caagttcagtgtaaagtgtacgattcacttctacaactaccagggattgtacagggaaca
cgaggactgatgcttagctccatcatgctgagctttatttctatcttggtggaactggtg
ggcatgaggtgcaccacctgtatggcagatcaaccggagcagaaggacaaagtggctcta
gttggaggagttatcttcattatcgctggtctgcttgctctagtgggaacgtcttggtat
ggccatagaatagccgcagagttctacgacccattcactccgactaattccagatatgaa
ttcgggagtgccctgtttgttggatggggagctgcctgtctcatcatcataggagggagc
ttcctgtgctgcaactgctccagcaagggctcagggaaatctccccgctacccagcatcc
agctctgcaggccagccgggcagggactacgtctag
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integrated database retrieval system
