Anoplopoma fimbria (sablefish): 129089245
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Entry
129089245 CDS
T09102
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04382
Cornified envelope formation
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129089245 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129089245 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129089245 (lamc2)
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GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
YwqH-like
ATG17_like
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
129089245
NCBI-ProteinID:
XP_054452611
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Position
3:complement(714223..729193)
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AA seq
1121 aa
AA seq
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MRSSWSSLAIVLFLAALCAVQATYQHYSRCDCNGRSRYCLRDAQGLHCVDCQGNTVGRHC
ERCKDGFHLLGAALSCTPCRCNSTGSISATCDSRGRCNCKDGVTGDKCNRCPGGPIGPNG
CSQSRKPREDSGSRICFCYGHSSRCSAQSSYSVHSITSTFADGPEGWRAATAQGVTPKDV
HFRWSPKHQDLEVISKNSLPVYLFAPAPYLGNQLLSYGQNFSFSLRLDRGVRHPSTNDVV
LEGAGLRVAASLGDLRSIVPCGQKINYSFRLDEQPGSRWRPQLSPSQFQTLLQNLTAVKV
RATFGENGRGYLANVRLVTARRADGAPARWVQTCSCPPGYDGEFCERCSAGFRRKSPADG
AFSPCEPCSCRGGSCDPQTGDCYSADETPCSEGSYRDPWQPGTCVKCPCLDGVSCSLPAG
SLTPQCDPCPTGSTGPRCDVCQEGFYRGPPRGDVVQQTCRPCRCNGHIDVSVARSCDRIT
GECLKCLNNTTGPRCEACVPGFYHGRATDACKPCDCDLQGSESRQCDDSGLCRCRPGFEG
LRCQRSNCPACFSSIKTKMEAYEIKLKELEILISAGPKQPGRNQMEAALRTMEKMVIDLQ
YNTELLEGQEKSLQGRLSSISRSQLDEGRILQNIADTADDVKQQQKTYRTKVEAVRSLMV
EMKRNLDEAKDDLRSAEIPQGDAPLDSNPFSSLVPTAISLADKHQTTADAVQQTTNEALS
DSKKSLALVRTLMNKENKVKMLIGDLKTMYDKTSAQVKGLEKQATQLSSEAQNESTMADD
MLKNIVNLERTIPSSMKGQVDDMVSRLDDVKQTMDEDISDLEVLQDGVLRDKATTEDLLA
KGKAAKQEFDDLVDRVDVAKAITDGALQRINSNTNELDDALNTLGGFDQQINRGKALADE
AIKRLPGINATIQKAVGSNAKTVAVLGDVSEDYNKAQGTIGELVDLVNSLEGTIRSLPSS
AVLVNEATKQNKDSKDLKTKASGLAGDLVSELDAGRILEDNAAEASVGATGAFNNAVLTR
DAVGETLRDISRLLAKMNQTGAVDDTQLKQLEASVAGAQRDVEDSLKPRLRDMEDQEAAY
RRRLTAINLDIANILKDIDNLKEIKKTIPRHCLNMPPLEQP
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcagctggagttcactcgccatcgttctttttctggctgcactttgtgccgtc
caggccacctaccaacactactcgcgttgcgactgtaatgggaggtctcggtactgcctc
cgggatgcccagggccttcactgcgtcgactgtcagggaaacactgtgggccgccactgc
gaacgctgcaaggacggcttccacctgctgggggcagcactgagctgcacgccctgccgc
tgcaactccacaggttccatcagcgccacatgtgacagcagggggcgctgcaactgtaaa
gacggcgtcaccggagataaatgtaaccgctgcccgggcggaccgatcgggccaaacggc
tgctcgcaaagtcgtaagcccagagaggattctgggagtcggatctgtttctgttacggt
cacagcagcagatgttctgcacagtccagttactccgttcacagcatcacctccaccttc
gccgatggtccagagggctggagggcggcgacggcgcagggcgtcacccccaaagacgtc
cacttccgctggtcacctaaacaccaggacctggaggtgatctccaaaaacagcctgccc
gtctacctgttcgccccagctccttacctggggaatcagttgctgagttacggtcagaac
ttttccttctccttgcgtctggaccgcggcgtccgacacccgtccaccaacgacgtggtt
ctggaaggagccggcctccgagtggccgcctcgctgggcgacctgcgatccatcgtcccc
tgtggacagaaaataaactacagtttcaggctggatgagcagcccggcagccggtggagg
cctcagctctcgccctcgcagttccagacgctcctccagaacctcaccgccgtcaaggtc
cgggcaacatttggagaaaatggacgtggatatctcgccaacgtgcggctggtgactgcg
cggcgtgccgatggcgcccccgcccggtgggtccagacctgcagctgcccgccaggttac
gatggcgagttctgcgagcgatgctcggctggcttcagacgcaagagcccggcggacggg
gccttcagcccctgtgagccctgcagctgcagaggaggcagctgtgacccgcagacggga
gactgctactccgccgacgagacgccctgctccgagggctcctaccgagacccctggcag
cctggaacctgtgtgaagtgtccctgtctggacggagtgtcctgctcactgcctgccggg
tcactgacgccccaatgtgacccctgtccaaccggaagcacaggtcctcgctgtgacgtc
tgtcaggagggtttttaccgcggccctcctcgtggcgacgtcgtgcagcaaacctgcagg
ccctgccggtgcaacggacacatcgacgtcagcgtggcgagaagctgcgatcgcatcacc
ggcgaatgtctgaagtgtctgaacaacacgacggggccgcgctgcgaggcctgtgtgccg
ggtttctaccacggccgagccaccgacgcctgcaaaccgtgtgactgcgaccttcagggc
tctgagtccagacagtgtgacgattcgggtctctgtcggtgcagaccgggcttcgagggt
ctgaggtgccagaggtccaactgtcccgcctgtttcagctccatcaagaccaagatggag
gcgtacgagatcaaactgaaggagctagagattctgatctcagccggtcccaaacaaccc
ggcaggaatcagatggaggctgctctgaggaccatggagaagatggtgatcgacctgcag
tacaatacagagctgctggaaggacaggagaagagcctgcagggccgcctgtcgtccatc
agcaggagtcagctggacgagggccggatcctccagaacatcgccgacacggcggacgac
gtcaaacaacaacagaagacctacaggacgaaggtggaggcggttcggagtctgatggtg
gagatgaaacgcaacctggacgaggccaaagacgacctcagatcagctgagattcctcaa
ggagacgctccgctggattccaaccccttctcttctctggtgccgacggccatcagtctg
gctgataaacatcagacgacagcggacgctgtgcagcaaaccaccaacgaagctctgagt
gactcgaagaagagtctggctctggtccggaccctcatgaacaaagagaacaaagtcaag
atgctgatcggagatctgaaaaccatgtacgataagacttcggcccaggtgaagggtttg
gagaagcaggcgacccagctgagcagcgaggcccaaaacgagagcaccatggcggacgac
atgctcaaaaacatcgtcaacctggaacgaacaatcccgtcgtccatgaaggggcaggtg
gacgatatggtttccaggttggatgacgtgaagcagacgatggacgaggacatctcagac
ttggaggtgctgcaggacggcgtgctgcgagacaaggccaccaccgaggacctgctggcc
aagggcaaggccgccaagcaggagttcgacgacctcgtggacagagtcgacgtcgccaag
gccatcacagacggcgctctgcaacgcatcaacagcaacaccaacgagctggacgacgcc
ctgaacacgctgggagggttcgaccagcagatcaacaggggcaaagctctggctgatgaa
gccataaagcgactgcccggcatcaacgccaccatccagaaggccgtcggcagcaacgca
aagacggttgctgtcctgggagacgtgtctgaagactacaacaaggcgcagggaaccatc
ggcgagctggtggacctggtcaacagtctggaggggacaattagatctttgccttcttct
gctgttctggtgaatgaagccaccaaacagaacaaggactcgaaggatctgaagactaag
gcgtccggtctggctggagacctggtctcggagctggacgccggcaggatactggaggac
aacgccgcggaggcttccgttggagccactggagctttcaacaacgccgtactgaccaga
gacgctgtgggagaaaccctgagagacatcagccgcctgctggccaaaatgaaccagact
ggtgctgtggacgacacgcagctgaagcagctggaggcctctgtggccggcgctcagagg
gacgtggaggacagtctgaagcctcggctgagggacatggaggatcaggaggccgcctat
cgccgccgactgaccgccatcaacctggacatcgccaacatcctgaaagacatcgacaac
ctgaaggaaatcaagaagacgatcccacgtcattgcttgaacatgcctccattagagcag
ccctga
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