Anoplopoma fimbria (sablefish): 129089386
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Entry
129089386 CDS
T09102
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129089386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129089386
Transporters [BR:
afb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129089386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
129089386
NCBI-ProteinID:
XP_054452779
LinkDB
All DBs
Position
3:complement(19207361..19243402)
Genome browser
AA seq
2329 aa
AA seq
DB search
MKTGSQIRLLLWKNWTLRKRQKVRFVIEICWPVLLFIGLVWLRKANPLYQQHECHFPNKA
MPSAGILPWIQSIFCNVNNPCFRYPTRGESPGVVSNYNNSVLARFYVDVQELLLNETEVQ
KLGRLWHDMSSFSNFMATLRNNPSVVSGRGLKIDDILKEDEVLTAFLLRNAGLSESLVYQ
LVNAEIRLEQFASGIPDLQLKDIACSQALLERFIIFPTRMGLHGVRNAMCALTQQSLQKI
EDILYANLDFFKIFKLMPQVMDSSSEGIDLHLWGRVLKATSENIQVLMDRTSSQELLKAV
SSMFQNGGPSSFTQLMSSMSSLFCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGTKSRNYV
YDDTATPSCNALMQTLESNPITKIVWNSVKPLLMGKILYTPDSPAVHKILKSANTTFEEL
ERLRNMAKAWEELGPQLWTFFDNSVQMNMIRDTLRNPTVMHFIDNNLEDTDFTTKHILNF
LFNGPERYREADMPNFDWRNIFNLTDQIIRMFNRYGECIHLDKFVAYTDESQMTHQALHL
LEENKFWAGVVFVDMYPWTASVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQ
RYIWGGFAYLQDMIEHGIIKLHTGQDWPLGVYVQQMPYPCYVDDLFMITLNRCFPMFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVDNGVIWYTCFIDCFIMMTASTALLTSIIMC
GKVLNYSNPVLVFFFLLTFTIATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHILCFA
WQDRITKNIKLGASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIMTSPLEKDTYSFLTSIL
MMVFDAVLYGVLAWYLDNVFPGQYGVSRPFYFPFQPSYWQTPAPSQTAMADNDPENPEPD
NVEKEVDSSETPETHMCNGSASRKACKHQRKRDQLERERELLKRQEQTQNQEECQDSETE
VFLYFHAGQLFFEPDPLGLVMGVQIQDLLKVFDGSSHPAVNCLSINFYEGQITSFLGHNG
AGKTTTLSILTGLFPPTSGTAYINGSDIRTDMDTIRSSMGMCPQYNILFKHLTVEEHILF
YSLLKGRTQEEAEREVEDMLVDLGLPHKRDDEAQNLSGGMQRKLSVAMAFVGGSKVVILD
EPTSGVDPYSRRSIWDLLLKYRAGRTVILSTHHMDEADLLSDRIAIISKGQLHCCGSPLF
LKNCFGVGFYLTLVRRMKDCKKKENDCDCASDCSCSCSICTKYKDQSQNQSQHLDRVLDG
DVDNITSLIHHHVPEAKLIEMIGQELTYLLPNKGFKHRAYASLFRELEETLADMGLSSFG
ISDTSLEEIFIKVTADGEAANNATTPEQWMLQRRKNDGKVGVEGDEEHNGVMQSNGITRG
ASDSSAGKGSRQVKGSTLILKQFHALLVKRFHHAIRSKKDFLAQIVLPASFVLIALIFTM
VVPPFGEYPSLTLTPWMYGQQFTFFSNEQPFDPKMKRFTERLLGRPGLGTRCMEGEPLEM
PCLNSTSEWEHPDVSPVVSNILQSPEWNQRNPSPSCQCSTSKKLTMMPICPIGAGGLPPR
QRIEATGDTLLDLTDRNISDYLIKTYPDLIRTSLKSKYWVNEQRYGGLSVGGQLPILDVN
PKDIQNVFHQLGQMLNITGGYYSGLALRETGPFLRYMESEFNVKVWYNNKGWHAMVAFMN
VANNAILRAFLPPSAKPVEFGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSF
IPASFVLYLIQERVTKAKHLQFVSGVSPVVYWVANFFWDMVNYSLSTAMVVGIFMAFDKK
CYTSPSNLPALIALLLLYGWSVTPMMYPMSYIFSIPSTAYVSLSCINLFIGINSSAITFI
LELFENNRSLLMFNEWLKKGLLVLPHFCLGRGLIDMAMSQAVTDVYARFGEEYIQDPFRW
DFVGKYIAFMAVEGFVYFILNLLIQYRFFLDRWLSYYKQTSVRDEDDDVAAERQRIYNGG
SKTDILQIRDLSKTYVGRKRAAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVS
SGEASVVGYSILSEILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPESEIPRVAE
WGIQKLGLTEYAGRCAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNA
IMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQNLKYKFGDGYVVTMKIK
AAKAGVSPDLEPVESFMESSFPNCVQREKHYNTLQYEIASSSLARIFQLVVANKERLSIE
DYSVSQTTLDQVFVNFAKQQTGEDEDVTLHRRTAGGRKDIKISPVQRKT
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggctctcaaatccgcctgttgctgtggaaaaactggaccctccgcaagaga
cagaaggtccgcttcgtgattgagatctgctggccggtgttgttattcattggtctggtg
tggctgaggaaggccaatccactgtaccaacaacatgaatgtcatttccccaacaaggcc
atgccttcagcagggattctgccctggatccagagcatcttctgcaacgtcaacaacccc
tgcttcagatatccaaccagaggagagtctccgggagttgtctccaactataataattca
gtattggctcggttctatgttgatgtccaggagcttctgctcaacgagacagaggtccag
aagctcggccgtctctggcacgatatgtcgtccttctcaaacttcatggcgacattacgc
aacaacccatctgtggtgtcaggccgtgggctgaagatagatgatattctgaaggaagac
gaggttctcacagccttccttttgcgaaacgctggcctttcggagtctctagtctaccag
ctcgtcaatgcggaaatacgtctagaacagtttgcctctggtatcccagacctgcagctg
aaagacatagcctgcagccaggccctgctggagcgcttcatcatcttccccactcgcatg
gggctccacggggttcgcaacgccatgtgtgccctcacccagcaaagtctgcagaagata
gaggacatcctctatgccaacctggacttcttcaaaattttcaaactgatgcctcaggtt
atggacagcagctccgaggggattgacctgcacctctggggccgggttcttaaggcgacg
tcggagaatatccaagttctgatggaccgaacaagctctcaggagctcctgaaggcggtt
tcgtctatgtttcaaaacgggggtccctcttcattcacccagctgatgtccagtatgtcg
agcctcttctgtggatacccagagggaggcggctccagggttctgtccttcaactggtac
gaggacaacaactacaaggtgtttctgggggtcaatggaaccaagagccgcaactatgtc
tatgacgacactgccactccctcctgcaacgccctgatgcagaccttggagtccaaccct
atcacaaaaattgtgtggaattcagtcaagcccctgctgatgggaaagatcctgtacacc
cccgactcccctgccgtccacaagatattaaagagtgccaacacaacattcgaggagtta
gagaggttgcggaacatggccaaggcctgggaggagctgggacctcaactctggactttc
ttcgacaacagtgtacagatgaacatgatcagggacacgttgagaaacccgacagtgatg
catttcattgacaataatctggaggacactgactttaccaccaaacacatcctcaacttc
ctgttcaacggtccagagcgatacagggaggcggatatgcccaactttgactggaggaat
atttttaaccttacagaccagatcatacgaatgttcaaccggtatggagagtgcatccac
ctggataagtttgtggcttacacggatgagtcccagatgacccatcaggccttgcacctg
ctggaggagaacaagttttgggccggtgtggtctttgtggacatgtatccctggaccgct
agtgtaccgccacatgtcaagtacaagatccgcatggacattgacgcagtggagcgcacc
aacaagatcaaagacaggtactgggaccccggacccagagcagaccccatggaggatcag
aggtacatctggggaggctttgcctacctgcaggacatgattgaacacggcatcattaag
cttcacacaggccaagactggccactcggggtctacgtccagcagatgccatatccgtgc
tacgtagatgacctcttcatgatcacactgaaccgctgcttccccatgttcatggtgctg
gcctggatctactcggtgtccatgactgtgaagagcatcgtgctggagaaggagctgcgg
ctcaaggagactctcaaggccatgggggtcgacaacggagtcatttggtacacgtgtttc
atcgactgcttcatcatgatgactgcaagcacggcgctgctcacctccatcatcatgtgt
ggaaaggtgctgaattacagcaaccccgtccttgtcttctttttcctgctgactttcacc
atcgccaccatcatgcagtgtttcctgatgagtgtgttcttcaacaaggccaacctggca
gcagcctgcagcggaatcatctacttcacactctatctgccgcatatcctctgctttgcc
tggcaggaccgcatcaccaagaacataaagttgggcgctagcttgttgtctccggtggcc
tttggattcgggacggagtacttgtcgcggtatgaggagcagggtttgggcctgcagtgg
gacaacatcatgaccagcccgttagagaaagacacctactcctttctcacttccatcctc
atgatggtatttgatgctgtcctctacggcgtcctggcctggtatctggataacgtcttc
ccaggacagtacggcgttagtcgaccattctacttcccattccagccctcctactggcaa
acaccggcaccctcacaaacagcaatggctgataacgatccagagaatcctgaaccagac
aacgtggagaaggaggtcgatagcagtgaaacaccggagacacacatgtgtaatggttca
gcgagcaggaaagcctgtaagcaccaacgtaagagggatcaactggagagagagagggag
ctgctaaagagacaagagcaaactcaaaaccaggaggagtgtcaggactcagagacggaa
gtctttttgtatttccatgcaggtcagttgttctttgagcccgacccattgggcctggtg
atgggggtgcagattcaggacctgctgaaggtgttcgatggaagttctcatccagctgtc
aactgtctcagcatcaatttctacgaaggccagatcacatcctttttgggtcacaacggg
gctggaaaaaccaccactctgtccatcctgacgggcctgttccctcctacatctggcaca
gcctacattaatggaagcgacattaggactgacatggacacaattcgctcctccatgggg
atgtgcccgcagtacaacatcctcttcaaacatctcacagtggaagagcacatcctgttc
tactcactgctgaagggtcggactcaagaggaggcggagagggaggtcgaggacatgctg
gtggacctcgggctgcctcacaagagagacgacgaagctcagaatctctcaggcggtatg
cagaggaaactgtcagttgccatggcgttcgttggagggtcaaaggttgtgatcctggac
gaacccacctcgggagtggacccgtattccaggagatccatctgggacctcctactgaaa
tatagagctggccggacagtgatcctgtcaactcatcacatggacgaggctgatctgctg
agtgaccgcatcgccatcatctcaaaaggacaactccactgctgtggatcccccctcttc
ctcaagaactgttttggagttggtttctatttgacacttgttcgccggatgaaggattgc
aagaagaaagagaatgattgtgactgtgcctcagactgctcctgttcctgctccatttgt
accaaatacaaagatcagtctcagaaccagtcccagcatctagacagagttctggatggg
gatgtagacaacatcaccagcctcatccaccaccacgttcctgaagccaagctgatcgag
atgattggccaggagttgacctatctgctccccaataagggcttcaaacatcgagcgtat
gccagcctgttcagggagctggaggagacgctggctgacatgggcctcagcagctttggc
atctctgatacatcactagaagagatcttcataaaggtcactgccgatggagaagccgcg
aataatgccaccactcctgagcagtggatgttacagcggagaaaaaacgacggcaaagtt
ggtgtagagggagatgaagaacacaatggggtgatgcagtctaacggcattacccgtggt
gcttcggacagcagtgcaggaaagggctccaggcaggtgaaagggtccactctgatcctg
aagcagttccatgcgctgctagtgaaacggtttcaccacgccataagaagcaagaaagac
ttcctggcacagatcgtccttcctgccagttttgtcctaatagctctgatcttcaccatg
gtcgtccctccgtttggagaatacccaagtctgactctgaccccctggatgtacggacaa
cagttcaccttcttcagtaacgagcaaccatttgaccccaagatgaaacgcttcacagag
cgtttactgggcagaccaggcctggggacacgctgcatggaaggagaaccactagaaatg
ccctgtcttaacagtacatcagagtgggagcatcctgacgtctctccggtggtcagcaac
atcttacagagtccagagtggaaccagagaaacccgtctccctcctgccagtgcagcacc
agtaagaagctcactatgatgcccatctgtcccatcggagcaggaggcctgccccctcgc
caacgaatcgaggccacgggagacacgttgctggacctgacggacaggaacatctctgac
tacctgattaaaacctaccccgatctcatcagaaccagtttgaagagcaaatactgggtg
aatgaacagagatatggaggtctgtcagtgggaggacaactgcccatcctggacgtcaac
ccaaaagacatccagaatgttttccatcaactgggacaaatgctcaacatcacagggggt
tactattctggacttgcactgagggagaccggtcctttcttacgatatatggaaagtgaa
ttcaatgtaaaggtatggtataataacaaaggctggcacgccatggtggccttcatgaat
gtggccaataacgccattctgcgggcctttctacctccatcagccaaacctgttgagttt
ggcatcaccgcaatcaaccatcccctgaacctcaccaaagagcagctttctgaagtcaca
gtcttgaccacttcagtagacgctgtggtggcgatctgtgttattttcgccatgtccttc
atccccgcgagcttcgtcctctacctcatccaggagcgtgtgaccaaggccaagcacctg
cagtttgtcagcggggtcagccctgttgtgtactgggtggccaatttcttctgggacatg
gttaactactctctcagcactgcaatggtggttggcattttcatggcctttgacaaaaag
tgctacacatcaccatcgaacctgccagcacttatagctctgcttctactatatgggtgg
tcggtgacgcccatgatgtaccccatgtcctacatattcagcatcccaagtactgcgtat
gtgtccctgtcctgcatcaacctgttcataggcatcaacagcagcgccatcaccttcatc
ctggagctttttgaaaacaatcggtctttgctgatgttcaatgagtggctaaagaaaggt
ctgctggtgctccctcacttctgcctggggcgaggactgatagacatggctatgagccag
gctgttactgatgtttatgccagatttggtgaagagtacatacaggaccctttccggtgg
gactttgtcgggaaatatattgctttcatggcagtggaaggctttgtctactttattctc
aatctactgatccagtaccggttcttcttggaccgctggttatcatactacaagcagact
tcagtaagagatgaggatgatgacgtggcggcagagaggcagagaatttataatggaggg
agcaaaacagacatcctgcagatcagagatctctctaagacatatgtgggcaggaagagg
gcagctgtggaccgaatttgtgtgggtgtccctgcgggagagtgcttcggtctcttggga
gttaatggagctggaaagacgacgaccttcaagatgctgactggtgacactgatgtcagc
tccggggaggcttctgtggttggttacagcatcctgtcagagattctggacgtgcaccag
aacatgggttactgccctcagtttgatgccattgacgagctactaactggcagggagcat
ctgtacctctacgctcgtctcagaggggtgcctgagtctgagatccccagagtggcagag
tggggcatccagaagctgggtctgacggagtacgccggccgctgtgctgggacatacagt
ggaggcaacaagcgcaaactctccacagctatagcaatgattggttgcccagcactggtg
ctgctggatgagcccacgacagggatggacccccattctcgacgcttcctgtggaatgcc
atcatgagtgtcatccaggacggcagggccgtggtgctaacatcacacagtatggaggag
tgtgaggccctctgcactcgactagccatcatggtcaatgggaccttcaagtgtctgggt
accatccagaatctcaaatacaaatttggtgacggctacgtagtgaccatgaaaatcaag
gcagctaaagcgggcgtgtccccagatctggagcctgtcgagtccttcatggagagcagc
tttcccaactgcgttcagagggagaagcactacaacacactgcagtacgagattgcctcc
tcctccctagccaggatatttcagctggtggtggccaataaagaaagactcagcatcgaa
gactactctgtttcccagacaacactggaccaggtgtttgtcaactttgccaagcaacag
acaggagaggacgaggacgtgactttgcatagacgaacagcaggtggaagaaaagacatc
aagatctcaccggtgcagaggaagacatga
DBGET
integrated database retrieval system
