Anoplopoma fimbria (sablefish): 129089392
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Entry
129089392 CDS
T09102
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04145
Phagosome
afb04814
Motor proteins
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129089392
09142 Cell motility
04814 Motor proteins
129089392
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129089392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129089392
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129089392
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
129089392
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
129089392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Nbas_N
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
129089392
NCBI-ProteinID:
XP_054452794
LinkDB
All DBs
Position
3:23840308..23848058
Genome browser
AA seq
610 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKQAGGGSSGGHEDSDLERKRR
EAEVLLQSVGITPDLSHVPAPMSPSNKSVGSDAGSQDSGDGNAGPRRGAVRLGMSKVTQV
EFAPKELVSYCKETQTPTEALTHSDQKADEEEDEEINAPAVAGDAQEEKDEHDKQQEEDT
PKELTEEEKLQVLHSEDFLSFFERGSRIVERALAEHVDVCFDYSGRDLEDKEGDLQAGAK
LVLNRQFADERWTRNRVVTCLDWSPQYPELLVASYNNNEDAPHEPDGVALVWNLKYKKGT
PEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPV
YCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDV
NNFVVGSEDGSVYTACRHGSKAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDW
TVKLWSTKSTRPLYSFEDSCDYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTAS
VCVDGAPALNRVRWAHSGKEIATGDSDGQVQVYDVGEQICVPKADEWTRFVRTLAEINES
RDEAEELANV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaagagcgagctgaaggctgaactggagaggaagaagcaacggatcgcccag
atccgagaggagaagaagcgaaaagaggaggagaagaaaaagaaggatggagactcaaag
caggctggtggtggctcctcaggaggtcatgaagactctgacctggagaggaagaggagg
gaggcggaggtgctgctgcagagtgtcggcatcacccccgacttatcccacgtccccgcc
cccatgtctccctccaacaaatcagtgggcagcgatgcgggaagccaagattctggggat
ggaaacgccggaccaagacgtggagccgtgaggctgggcatgtccaaagtgactcaggtg
gaatttgccccgaaggaattagtgtcctactgcaaagaaacacagacacccaccgaggca
ctgacacacagcgatcaaaaagcagatgaggaagaggatgaggagataaatgctcccgca
gttgcaggggatgcccaggaggagaaagatgaacatgacaaacagcaagaggaggatact
cccaaagagctgacagaagaagagaagcttcaggtcctgcactccgaggacttcctgtcg
tttttcgaacgaggcagcagaattgtggagagagctcttgctgagcatgtggacgtctgc
ttcgactacagtggcagagatctagaggacaaggaaggtgatttgcaagcaggtgcaaag
ctggttctcaacagacagtttgcagacgagcgctggactagaaacagagtggtcacctgt
ctggactggtcacctcagtatccagagctgctggtggcctcgtataacaacaatgaggac
gctccccatgagcctgacggggtggcactggtctggaacctgaagtacaagaagggcaca
cccgagtacatcttccactgccagtcagaggtgatgtcggccgggtttgcaaagttccac
cccaacctggtggtgggtgggacatactccggacagattgtcttatgggacaacaggagc
aacaagcgcacccctgtccagagaactcccctgtctgcagctgcacacacacacccagtt
tactgtgtgaacgtggtgggaacccaaaatgctaacaacctgatcagcatttccaccgat
ggcaaaatgtgctcctggagcctcgacatgctctctcagccgcaggacagtctggagctg
gtattcaaacagagcaaagcggtggctgtcacctccatggcctttcctctgggcgatgtg
aacaactttgtggtggggagcgaggacggctcggtctacacagcgtgtcgccacgggagt
aaggcggggatcactgaggtgtttgagggccatcatggtccggtgaccgggctgagctgc
cacagcgcgggaggacccgttgacttctctcatctcttcatctcctcctcctttgactgg
actgtcaaactctggagcactaagagcacccgtccgttgtactcgttcgaggacagctgt
gactacgtctatgatgccatgtggtctccgacacaccctgctctgtttgcttgtgtggac
ctggccggacgtctggacctgtggaacctcaataatgatacagaagttcccaccgccagt
gtgtgtgtggacggcgctccagcactgaaccgtgttagatgggctcactctggtaaagag
atagccaccggggactcagacgggcaggtgcaggtctacgacgtcggggagcaaatatgc
gtgcctaaggctgacgagtggacgcgctttgtcaggacgctggctgagatcaatgagagc
cgagacgaagccgaggaactggccaacgtctga
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