Anoplopoma fimbria (sablefish): 129089408
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Entry
129089408 CDS
T09102
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129089408 (fubp1)
03041 Spliceosome [BR:
afb03041
]
129089408 (fubp1)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129089408 (fubp1)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129089408 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_KHD4_2nd
Secretin_N
Motif
Other DBs
NCBI-GeneID:
129089408
NCBI-ProteinID:
XP_054452819
LinkDB
All DBs
Position
3:20090029..20099815
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AA seq
688 aa
AA seq
DB search
MADYSNVAPPSSNNGGGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSAMGGMGGPSRSISEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPDSGGMPDRSVTLTGGPESIQAAKRLLTEIVDKGRPAPAFNHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGGGGGGGGGGSSNGGDSLDVPVPRF
AVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGPPDQAQHAAEIISDLLRS
VQAGGPPGHGGGGRGRGRGQGNWNMGGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQ
QSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGGPGPH
GGPGPHGPPGPPGPPGAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDP
NKAAADANAAAWAAYYAQYSGQPQAPMTPTSGAPGTTQANGQGDPQAAGQSGQADYSKAW
EEYYKKTGQQSQQPQDYTKAWEEYYKKQGQAAPQATAAAAAAAATQPGGQPDYSAAWAEY
YRQQAAYYGTANPQAMGAAPQAPQVHPR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagtaacgtggctcccccgtcctctaacaacggcggcggaatgaacgac
gcttttaaagacgctctccagcgtgcacgacagatcgcagcgaagatcggcggtgatggc
gtggcggctcccccaacaaacgagttcggctacgggggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccagagacgaagaaagtg
gctacaaatgacgccttttcagcaatgggaggaatgggtggaccctcaaggtcaatatca
gaggagttcaaggttccagatgggatggttggattcattattggaagaggaggcgaacaa
atatcacgtctgcagcaagagtctggatgcaagatacagatagcgcctgacagtggagga
atgccagataggtcagtgacattaacaggaggaccagaatccatccaggctgcaaaaagg
ctactaacagagatcgttgacaaggggcgcccagctccagcattcaaccacaacgatggc
ccgggaatgactgtccaggagattatggtccctgcctctaaagccggtcttgtcattggc
aagggtggcgaaaccatcaaaagccttcaggaaagagctggagtgaagatggtcatgatc
caagacggaccccaaaacacaggcgctgacaagccactccgaatttcaggagagcccttt
aaagttcagcaagccaaagagatggtgatggaactgatcagagatcaaggcttcagggag
cagaggggcgaatatggttcacgagttggaggtggaggaggcgggggaggaggaggcgga
ggaggaggaggaggaagcagcaacgggggagacagcttagatgttcctgtaccccggttt
gcagtgggaattgttattggcagaaatggagagatgatcaagaaaatacagaacgacact
ggcgtcaggatccagtttaaaccagatgacggcagcacaccagaaaggatagcacagatc
atgggtccccctgaccaggctcagcacgcagcagaaataatttccgatctgctgaggagc
gtccaggccggcggtcctccaggacacggtggtggcggcagaggtcgtggtcgcgggcag
gggaactggaacatgggtggcccccctggtggcctgcaggagtttaccttcactgtccca
accatgaagactggtctcatcattggaaaaggtggtgagacaatcaagggcatcagccag
cagtcgggagccaggatcgagctgcagaggaatcctccacccaacgccgatcccaacatc
aaaatgttcacagttcggggctcccctcaacagatcgactacgccaggcagctggtggag
gagaaaattgggggaccagtcactccaatgggtggcccacacggaggtccaggaccacac
ggaggtccaggtccacatggtcctcctggaccacctgggcccccgggagctcccatgggt
ccatacaacccaggaccatacaaccagggacctccaggaccacatggtccaccggcgcct
taccagcctcagggatggggcaacggctacccacactggcaacagggacaacctgatcca
aataaagcagcagccgatgccaacgcagcagcgtgggcagcctactacgctcagtacagc
gggcagccgcaggctcccatgaccccgacaagcggagcacctggcacaactcaagccaac
ggccaaggtgacccacaggctgcaggtcagagtggacaggcagattactccaaggcctgg
gaggaatattacaagaaaacgggtcaacagagtcaacaacctcaggactacacgaaagcc
tgggaggagtattacaaaaaacaaggtcaagcagcccctcaggccacagcggcagcagca
gctgcagcagccacccagcctggaggccagccagactacagcgctgcctgggcggagtac
taccgtcagcaggccgcctactacggcacagccaacccccaggcgatgggtgcagcacca
caagcccctcaggtacacccccgataa
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integrated database retrieval system
