Anoplopoma fimbria (sablefish): 129089637
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Entry
129089637 CDS
T09102
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129089637 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129089637 (gabra4)
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129089637 (gabra4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129089637
NCBI-ProteinID:
XP_054452893
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All DBs
Position
4:5886035..5903825
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AA seq
557 aa
AA seq
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MLSAKKKKETATAMWPASIRTLLYFFCLATCVKKISGQTKKDERIYPENFTRILDRLLDG
YDNRLRPGFGGTVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIEILR
LNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMKNGTILYTMRLTISAQCPMKLVD
FPMDGHACPLKFGSYAYPKTEMIYTWTKGPEHSVEVPPESSSLVQYDLIGQTVSSETIKS
ITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIEHAKKKPAKC
PPVPQTTPVKVKDTEEALQQNPDSNGNLRKRMNYVSHQEARSHQRAMSTINISGVGRARA
LRSLAGGVNGSSSTLSRTSPKSESLLSVASSSAQLVKSAPQAAASTPDVMAATTCKQNAS
SSSLQHLLGPKLERIQMMGNKPELKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNM
VYWVVYLSKDTMVAKGG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgccaagaagaagaaggagacggcgacagcgatgtggcccgcttccatccgg
accctcctctactttttctgtttggccacttgtgttaagaaaatctccggacaaacaaag
aaggatgaaaggatttatccggagaattttactcgcattttggaccgacttctggacggc
tatgacaacaggctgcgacctggattcggcggaactgtgactgaggtcaagacggacatt
tatgtgaccagttttgggcctgtctcggatgttgaaatggagtacacgatggacgtgttc
tttcggcagacgtgggtggaccggaggctgaggtacgagggccccatagagatcctgagg
ctgaacaacctgatggtgaccaaagtttggaccccggacaccttcttcaggaacggcaag
aagtccgtggctcacaacatgacggcccccaacaagcttttccgcatcatgaagaacggc
accatcctgtacaccatgaggttgaccatcagtgctcagtgtcccatgaagcttgtggac
ttccccatggatggacatgcgtgccccctcaagtttggaagctatgcctatcctaaaaca
gagatgatctacacgtggaccaaagggcctgagcattcagtggaggttcctcctgagtcc
tccagcctcgttcagtatgatctcatcggccagacggtctccagcgaaaccattaaatcc
atcacaggtgaatacgtggtgatgacggtctactttcacttgaaacgtaaaatgggctac
ttcatgattcagacgtatatcccctgcattatgacagtaatcctctcccaagtgtccttc
tggataaataaagaatcggtcccggcacgcacagtcttcggcatcaccaccgtcctcacc
atgacgacgctcagtatcagtgcccgccactcccttcccaaggtctcctacgccacagcc
atggactggttcatcgccgtctgcttcgccttcgtcttctcggccctcatcgagttcgcc
gccgtgaactacttcaccaacgcgcagatcgagcacgccaagaagaagccggccaaatgt
cctccggtgccccaaaccacgcctgtcaaggtcaaggacactgaggaggcgctgcagcag
aatcccgacagcaacggtaacctgagaaagcggatgaattatgtttcccaccaagaggcc
cgcagtcaccagagagccatgtccaccatcaacatctcgggggttggtcgagcgagagcg
ctgcgatctttggccggcggagtcaacggcagctcctccaccctctcgcgcaccagcccc
aagtcggagagcctgctcagcgtggcctcctcctctgcccagctggtgaaaagcgcgccc
caggctgcggcgtccacgccagacgtgatggcggcgacgacgtgcaagcagaatgccagc
tcctcgtccctgcagcatctgctggggcccaagctggagcgcatccagatgatggggaac
aaaccggagctgaagcagacgccatgctcccagcccaccaccgccggaatgggaggaacc
agcaaaattgacaagtatgcacggatcctgttcccagtgtccttcggagcttttaacatg
gtctactgggtggtttacctatcaaaggacacaatggtggctaaagggggctag
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