Anoplopoma fimbria (sablefish): 129089644
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Entry
129089644 CDS
T09102
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129089644
04082 Neuroactive ligand signaling
129089644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129089644
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129089644
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129089644
NCBI-ProteinID:
XP_054452905
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All DBs
Position
4:5921465..5947988
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AA seq
455 aa
AA seq
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MWSRESAPPLLVCLLALTALWKTRSVNADATSDAFKTNITLFTRILDSLLDGYDNRLRPG
LGDRITEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFHGPMNILPLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTISEVTYAWTRNASDSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVTEKKKERASV
VKKNNAYAVAVANYAPNITKDSGTLPTIAKGGASDPNKPRADGKAPDSKKTFNSVSKIDR
MSRILFPVLFSSFNLVYWATYLNREPVIKDMVPST
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagagagagcgctcctccactcctcgtctgcctgctggcgctcacagctctc
tggaaaaccaggtcagtgaatgccgatgccacatctgatgcctttaaaaccaacatcacc
ctgttcacacgtatcctggacagcctgttggatggatatgacaaccgtctacggccaggc
cttggtgacaggataactgaggtgaagacaaacatctacgtcaccagctttggaccagtt
tcagacacagacatggagtacaccatagacgttttcttccggcaaagctggaaggatgag
aggttgaaatttcacggaccaatgaatattctgcccctcaacaacctgatggccagtaaa
atctggactccggacaccttcttccacaacgggaaaaagtctgtggctcataacatgacc
atgcctaacaagctgctgaggatcaaagatgacgggactctgctgtacacaatgaggtta
actgtgcatgcagagtgcccaatgcatctggaggatttccccatggactttcattcctgt
ccactaaaatttggcagctatgcgtacacaatctcagaagtgacttatgcttggactcgt
aatgcctctgactctgtggtggtggaaggagaaagctcccgcttgaaccagtacgacctg
ctgggacaaacggtcggacaagaaaccatcaaatcgagtacaggtgaatacacggtgatg
acagcccatttccacctgaagaggaagattggctactttgtcatccagacgtacctcccg
tgcatcatgaccgtcattctctcccaagtgtctttctggttgaatagagaatcagtaccg
gcgaggaccgtgttcggtgtaaccaccgtcctcaccatgacaacgctgagtataagtgcg
aggaactcccttcccaaggtggcctacgccaccgccatggactggttcatcgccgtctgc
tacgccttcgtcttctccgctctgatcgagttcgccaccgtcaactacttcacaaagcgc
ggctgggcctgggacggaaagagcatcgtgaccgagaagaaaaaagagagggcatctgtc
gtcaagaagaacaacgcctacgctgtggcggtggccaactacgcgccaaacatcaccaag
gactccggcacacttccgaccatcgccaaaggcggagcttcggatcccaacaagccccga
gcagacggcaaagcccccgacagcaagaagacgttcaacagcgtgagcaaaattgacagg
atgtcaaggattttgtttccggttctctttagcagcttcaacctcgtctactgggccacc
tacttaaacagagaacccgttataaaggacatggtcccctctacttag
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