Anoplopoma fimbria (sablefish): 129089712
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Entry
129089712 CDS
T09102
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129089712
04082 Neuroactive ligand signaling
129089712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129089712
Ion channels [BR:
afb04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129089712
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
Red1
Motif
Other DBs
NCBI-GeneID:
129089712
NCBI-ProteinID:
XP_054453022
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Position
4:14215363..14232531
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AA seq
574 aa
AA seq
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MNFSGKLTNVLLLVLLAAQGCFSSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHVWNDYKLKWAPIEYDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPEWVRSVFLGVLPRVMLMRRPIDQGCSSPA
GITGGTGRGGSRVGRKKRKTSIGGGSGSGSVIVGGITGGVACPPLDVGAGGGGGGGAASA
GGSMNCVEYGEMNRDLNRRCPYRGKEVPTPVPPPMVPPPPPPPPPPPPPPPTQAPPTQGP
QESELPKLPRPLNAPSPVSAIVAFSVVSPEIKQAIESVKYIAENMRTRNKAKEVEDDWKY
VAMVIDRIFLWVFVTVCVLGTVGLFLQPLISFLK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctccgggaaactaaccaacgtcctcctgctggtgctcctcgcagcgcaaggc
tgtttttcatctaagggagaggacagattatttcggaggttgttcaggaggtacaaccag
ttcattcgaccagtggagaatgtatcagatccagtcacagtcgagtttgaggtctccata
tctcaacttgtcaaagtggatgaagtgaatcagattatggaaaccaatttgtggctgaga
catgtctggaatgactacaagctgaaatgggcccctattgagtacgatggaattgagttc
atacgagttccttccaataaaatctggagacctgacattgttttgtacaacaatgctgta
ggtgacttccttgtggaagacaagaccaaggctctgctgaagtttgatggcaccatcacc
tgggttcctccagctattttcaaatcctcctgccccatggatatcacctactttcccttt
gactaccagaactgctccatgaagtttggctcctggacttacgacaaggccaagattgac
cttgtgctgattggctcaaaggtgaacctgaaagacttctgggaaagtggagagtgggag
atcatcgacgcaccaggatacaagcatgacatcaagtacaactgctgcgaggagatctac
ccggacatcacctactccttctacatccgccgcctgcctctcttctacaccatcaacctc
atcatcccttgcctcctcatctccttcctcacggtgctggtcttctacctcccgtctgac
tgcggcgagaaggtcaccctgtgtatctccgtcctcctctccctcactgtgttcctgctg
gtcatcactgagaccatcccttccacgtcgctcgtcatccccctgatcggcgagtacctc
ctcttcaccatgatttttgtcacgctcagcatcgtcatcactgtgtttgtgctaaacgtc
cactaccgaacccccatgactcacactatgccggagtgggtgaggtctgtgttccttggg
gtgctgcccagggtgatgctgatgaggcggcctatcgaccagggctgctcctcccctgcc
ggtattacaggaggcacaggaagaggagggagcagagtgggacgcaagaagagaaagaca
agcataggaggaggaagcggctcaggaagtgtaatcgttgggggtataactgggggtgta
gcgtgtccaccactggatgttggggcaggaggaggtggaggaggaggggctgcctcagct
ggtggctcaatgaactgtgtggagtacggtgagatgaaccgtgacttgaacagaaggtgc
ccctacagaggcaaagaggtaccgactcctgtccctcccccgatggtgccacctcctcct
cctccccctcctccccctcctccacctcctcccacacaggcacccccaacccaggggccc
caggagtcagagttgcccaagttgccccggccgttgaatgccccttcgcccgtcagcgcc
attgtcgccttctcagtggtgtcgccagagatcaagcaagccatagagagcgtgaagtac
atcgcagagaacatgaggactcgcaacaaggccaaagaggtggaggacgactggaagtac
gtagccatggtcatcgacaggatcttcctgtgggtttttgtgacagtgtgtgtgctggga
acggtgggactcttcctccagccacttatcagcttcttaaaatga
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