Anoplopoma fimbria (sablefish): 129089727
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Entry
129089727 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor COE3-like
KO
K09103
early B-cell factor
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129089727
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129089727
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
129089727
NCBI-ProteinID:
XP_054453048
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Position
4:complement(25746994..25883307)
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AA seq
557 aa
AA seq
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MFSIQDSLPRGALTMKEEPLPTGMTPVRSWMQGAGILDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSYVDFVEKDKEYNGEKTNNGIHYRLQLLYSNGI
RTEQDLFVRLIDSMTKQPILYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEEVQPSFLESATPCIKAISPSEGWTTGGATVILIGDNFFDGLQVVFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADLTEALYSVPAVTT
SCRLSGSAAHSGMMGVNSFSSQLAVNISEASQADQGEGYSRNSNSVSPRGYVPSSTPQQS
NYNTITSTMNGYGAGMTNLGVPGSPSFLNGSTNSAYAIKQKSAFAPVVRPQTSPPPXCTT
TNGSNLQAMAGLIVPPM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgttctccatccaggacagcctcccccggggggccctgaccatgaaggaggagccgctg
cccaccggcatgaccccggtccgctcctggatgcagggagcagggattttggacgccaac
acagcagcacagagcggtgttggtttagcccgagctcactttgagaagcagccgccgtcc
aatctgaggaagtccaacttcttccactttgttctggcgctgtacgaccgacagggtcag
ccggtcgagatcgagaggacgtcctacgtcgacttcgtggagaaagacaaggagtacaac
ggagagaagaccaacaacgggatccactacagactacagctcctctacagcaacggcatc
aggacagaacaggatcttttcgttcggctgatagactccatgaccaaacagccgatcctc
tacgaaggtcaggacaagaacccagagatgtgtcgcgtcctcctcacccacgagatcatg
tgcagccggtgttgtgacaagaagagctgcggaaatcgcaacgagacgccctccgacccc
gtcatcatcgacagattcttcctcaagttcttcctcaagtgcaatcagaactgtttgaaa
aatgcaggaaacccacgagacatgaggaggttccaggtggtgatctccactacagtcaac
gtggacggacacgtgctggcggtgtcagacaacatgtttgtccacaacaactccaaacat
ggccgccgcgcccgacgcctggacccctctgaagaagtacaaccctctttcctagaatca
gccacgccctgcatcaaagccatcagcccgagcgagggctggacgaccggtggagccacc
gtcatcctcatcggggacaacttcttcgacggcctgcaggtcgtcttcggcaccatgctg
gtctggagcgagctgatcacccctcacgccatccgggtccagactccccctcgtcacatc
cccggggtcgtggaggtcacgctgtcctacaaatccaaacagttctgcaaaggagcaccg
ggacgcttcgtctacaccgccttgaacgagcccaccatcgactacggcttccagaggtta
cagaaggtcatccctcgccaccccggggaccccgagaggttacctaaggaggtgctgttg
aagcgagcagccgacctggtggaggctctttatgggatgccacacaacaaccaggagatc
atcctgaagcgggcggccgacctcaccgaggcgctctacagcgtccccgcagtcacaacc
agctgccgtctctccggctctgccgctcactcggggatgatgggagtgaactcgttcagc
agtcagctcgccgtcaacatctccgaggcctcgcaggccgaccagggtgagggttactcc
cgtaactcgaacagcgtgtctcctcgcggctacgtgccgagctccacgcctcagcagtcc
aactacaacaccatcacgtccaccatgaacggatacggagcggggatgaccaacctgggc
gttcccggatcccccagcttcctcaacggatccaccaactctgcttacgcaatcaaacag
aagagcgccttcgcccccgtcgtgcggccacagacctccccgcccccancctgcaccacc
accaatggcagcaacctccaggccatggcaggtctcatcgtccccccaatgtga
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