Anoplopoma fimbria (sablefish): 129089738
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Entry
129089738 CDS
T09102
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129089738 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129089738 (cstf2)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129089738 (cstf2)
U7-dependent histone pre-mRNA processing factors
129089738 (cstf2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
129089738
NCBI-ProteinID:
XP_054453070
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All DBs
Position
4:complement(17090467..17100813)
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AA seq
502 aa
AA seq
DB search
MANLAAAAAAAAAAAIAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDNIQPQEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTPVQPLIPSGQVGGAPPVNPPSIPPSVPVSQPQ
PVPGMHVNGAPQMMQPPNMGVVPGPMPVPGPGPGPGPGQGQGPVPGPVGPPGPGGIPPRG
LLGDGPNDPRGGTLLSVTGEVIEPGRGYMAAPPPHQAPPVHMAQMPSGPPPDMRGPPMDM
RGPPMGEPRNMMGDPRGPPMMEPRGPPMETRGRDPRAMDARGPVTSQRVPMATGMQVPVP
HSMGPNAPPPARPGPGISGVPPSGGGFSPGQNQVSTQDQEKAALIMQVLQLTPEQIAMLP
PEQRQSILILKEQIQKTAGGAP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttagccgctgctgctgcggctgcggctgctgctgccatcgccgcgaacaga
gacccggccgttgatcgctcgttacgatcagtgttcgtgggaaacatcccgtatgaagct
acagaggagcagctgaaagacatcttctctgaagtgggacttgttgtcagcttcaggttg
gtgtatgacagggagaccgggaagccaaagggatatggtttctgtgaatatcaggaccag
gagacggccctcagtgccatgcggaacctgaacgggagagagttcagtggacgggccctc
cgtgttgacaacgcagccagtgagaaaaacaaggaggagctcaaaagtttgggaacagga
gcccccattattgagtctccttatggagacaacattcagccacaggaagccccggagtcc
atcagcagagctgtggccagtctcccacctgagcagatgtttgaactcatgaaacagatg
aagctgtgtgtgcagaacagtccccaggaggcgaggaacatgctgctgcagaaccctcag
ctggcctacgctctgctgcaggcccaagtggtgatgcggattgtggaccctgagatagcc
ttgaaaatgctccaccgtcaaacacctgtccagcctctgattcccagcgggcaggttgga
ggagcaccgccggtcaacccgccctctattccgcccagcgtgccggtgtctcagccgcag
cctgtgcctggaatgcatgtcaatggagcccctcaaatgatgcagccccccaacatgggt
gttgtccctggaccaatgcctgtcccaggcccgggaccaggaccaggcccaggacaagga
caaggaccggtaccagggccagtcggacctccaggaccaggcggtatcccacccagaggc
ctgctgggagacggtcccaatgatcccagaggaggaactctactatctgtcacaggagag
gtcatagagccgggtcggggttacatggcagctccaccaccccaccaagccccacctgtg
cacatggcccaaatgccaagtggaccccctccggatatgagaggccctccgatggatatg
agaggcccacccatgggcgaaccacgcaacatgatgggtgaccccagagggccccctatg
atggagccacgcggacccccaatggaaaccagaggtcgtgacccgagggcgatggacgct
cgtggtccagtgacgagtcagagggttcccatggcaacgggaatgcaagtccccgttcct
catagcatgggtcccaacgcgcctccacctgcaagaccgggtcctggtatctctggcgtt
cctccatcaggaggaggattcagtccggggcagaaccaggtctccacacaggaccaggag
aaggctgccctgattatgcaggtcctgcagctgaccccagaacagatcgccatgttgccc
ccggagcagcggcagagcatcctcatcctcaaagagcagattcagaagactgcaggaggg
gcaccttga
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