Anoplopoma fimbria (sablefish): 129089818
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Entry
129089818 CDS
T09102
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
afb03029
]
129089818 (ppargc1b)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
129089818 (ppargc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
129089818
NCBI-ProteinID:
XP_054453162
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All DBs
Position
4:24488187..24578287
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AA seq
932 aa
AA seq
DB search
MADCAPLLDEELSSFVFNYLTENSGSQYGEEEVCSDRLDTDFPDIDLSQLDTSDFDSVNC
LSELQWCNDQPADTSPTSIHYSTPDELFEIEEENAALLAALTDSLDGMVDAEVGGLSVFP
ALGGEPCQEDEEEDNLPLSAEDFSQSMGSETDDPSLLMKLLLTPPNVPAAVDAHKDRVHG
HRYSNRSLHLRQTRPLVKSDLRQERKPRAVRPAGRLCTELHRHLTTARQTGDTPAPDTEE
DEEEEDDEDSDSEEDEEDEEEEEEESSSSEVEGVAVVAPAEPPKPQFSSEKELHSVVELI
TYMHTYCLPTRKQQGWDRKDRDAPRPRARPEGPRTAATNSHSRVVLVAASGTGGGLTGPS
GPRRLPFARRREMKANSLLRELLQQSSSYDVSKPYRLHSPPYAHSHSPSRVSALTAKSAQ
NYSHSSTTHKPELRKDSSSHERRSRSSEAQQSPDEAAEDGGSFSVRRSRRLASFPSRFAK
RLRPGRAREGERKDREEREEGRGGVKLLLTQAGGGTTMTETQAEQRTTSFSTTEPNKPCC
HNEKRACLCLTLNTKSTGESQFSTKPFEQTLSVDLCGTAGLTPPTTPPHKPVEDELFKPA
EGGKGGEGTGVGSGGDGGGGCGESVHSASSTNAAAKASSRPSRANHQRKLPEQTELYAQL
RRMGQAGDSDTHRTFGDHDYCALSLGESRKRSAAMLGAILQAQGGGDGVSLTLTPREADH
QVSDRNGKENGERLVSKIAEQLQQQTKALISSSPLPPSRCQSTAATPPFSEEEAERSSAS
RSPSPILHLCPDSPASKTDSSENSEICTDDKQRNKAKSDEDNCQVFYIHNLPTSVTQNML
RKRFQVFGKPEDCKVIICNEERCGVIKIRQAGVQKHWRERETVFQNGPAGLRRLTRKRYI
DLDEAGPGPVKSKYDALDFDTLLKEAQKSLHR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgctccactattagatgaggaactctcgtcctttgtcttcaattacctg
acagaaaactccggcagccagtatggggaggaggaggtgtgttcggaccgtttggacact
gacttcccggacatcgacctatcccagctggacaccagcgacttcgacagcgtcaactgt
ctcagcgagcttcagtggtgcaacgaccagccggcggacacgtcgccgacctccatccac
tacagtacgccggatgagctctttgagattgaagaggagaacgcggccctgctcgccgct
ctgaccgacagcttggatggcatggtggacgccgaggtgggcgggctctccgtcttcccc
gccctcgggggggagccctgccaggaggacgaagaggaggacaatcttcccctcagcgcc
gaggacttcagccagtccatggggtccgagacggacgacccatctctactgatgaagctc
ctgctgactcctcccaacgtgcccgcggccgtcgacgcacacaaagacagagtccacggc
catcgctatagcaacagaagcctgcaccttcggcagaccagacccctggtcaagagtgac
ctccgtcaggagcggaagccccgagcggtgcgtcccgcgggccgcctgtgcaccgagctc
caccgacacctcaccaccgcccggcagacaggggacactccggccccggacacggaggag
gacgaagaggaagaagacgacgaggacagtgattcggaggaggatgaagaagatgaggaa
gaagaagaagaagagtcttccagcagcgaggtggagggcgtggcggtcgtggcccccgca
gagccgccgaagcctcagttcagctcggagaaagaactgcactcggtggtggagctgatc
acctacatgcacacctactgcctgcccacacgcaagcagcagggctgggaccggaaggac
cgcgacgccccgcggccccgggccagacccgagggcccccgcacggccgccacaaactct
cacagcagagttgtcttggtggctgcttccgggactggcgggggcttaaccgggcctagt
ggcccccggaggctcccctttgcgaggcggagggagatgaaggccaactccctcctccgt
gagctcctgcagcagagcagctcgtacgacgtgagcaagccttacagactgcacagcccc
ccctacgcccactctcacagccccagcagggtgtccgctctcacggctaagtcagctcag
aactactcccacagctccaccacccataagccggagctgcgtaaagactcctcctcccac
gagaggagaagccgctcctctgaggctcagcaaagccccgatgaggcggcagaggacggc
ggctccttctcggtaaggcgctcgcgacgcctggcctccttccccagccgcttcgccaag
aggctgcggcctggacgggcgagggaaggggagaggaaggacagggaggagagggaggag
ggacgaggtggggtcaaactcctgctaacccaagcgggaggcgggacgacgatgacggag
acgcaggcggagcagcgaacgacgagtttcagcacgacggagccgaacaaaccctgctgc
cacaacgagaagcgagcctgcctctgtctgactctcaacactaagtccacaggggagtcc
cagttcagcaccaagcctttcgagcagacgctcagcgtggatctgtgtggaacggcaggt
ctcacccctcccaccaccccgcctcacaaaccagtggaggatgagctcttcaaaccagca
gagggaggaaagggaggtgaaggaacaggtgtcggcagcggcggcgatggcggaggaggt
tgcggcgagtcagttcactcggcctcaagcaccaacgccgccgccaaggcctcgtcccgg
ccgagccgcgccaaccaccagcggaagcttccagagcagacggagctgtacgcccagctg
cggcgcatgggccaggccggcgacagcgacacccaccgcacgttcggcgaccacgactac
tgtgctctgagcctcggggagagccgtaagcgcagcgctgccatgctgggcgccattctg
caggcgcaaggaggaggcgacggagtcagcctcaccctcacgcccagagaagcagaccat
caggtgtcggataggaacgggaaggagaacggggagaggctggtgtcaaaaatcgcagaa
cagcttcagcaacagaccaaggcgttgatatcgtcctcaccgctgccgccgtcacgctgc
cagtcgacggcggccacacccccgttctcggaggaagaggcggagcgttcgtctgcgtcc
cgctcaccctcgcccatcctccacctgtgtcccgactcccccgccagcaagacagactcc
agtgagaactctgagatctgtaccgacgacaagcagaggaacaaagccaagtctgacgag
gacaactgccaggtgttttacatccacaacctgccaaccagcgtgacccagaacatgctg
aggaaacgcttccaggttttcggcaaacccgaggactgcaaagtcatcatctgcaacgag
gagcgctgcggggtgataaagatccgccaggcgggggttcaaaagcactggagagaacgg
gagactgtgttccagaatggacctgcaggtctcaggaggctgacgaggaaacgctacata
gatcttgacgaggcgggcccgggtcccgtcaagagcaagtacgatgcactggactttgac
actctgctgaaggaggcccagaagtccctgcaccgctga
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