Anoplopoma fimbria (sablefish): 129089828
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Entry
129089828 CDS
T09102
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129089828 (npas1)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129089828 (npas1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
129089828
NCBI-ProteinID:
XP_054453181
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Position
1:complement(19445044..19469437)
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AA seq
794 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDNNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGISPHLRAEAGCHTGPESASSSASTSSLAGTPEPAPSSPHSPADEPLERGYF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCHPALVPVSNRSVRRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTNYYRWLQRRGGYLWIQSSATVSINHKAPHERNVIWVNYILSRTELPDTPL
DILQLPENVRAERLRVSSSPTDSSPQARGTTGSQPVKSSVGKSDPDTKGREKFTPAAIQS
EDRRKRLLRSDPEGAPPETRRRLEELRHAEESVSASSDLASDSEGEEEEETEWDQGGSSD
RLKQEDGGGGKQSRGGDTPSRGERGSRVHNGRAVIQQLKSVVTPSPLPGSPSIKTEHEAL
TTGGRWGSHTQTSSSHTHNAQPQPSHAHTPSSSPPKGLFTPPSPALSPAMSVSSPLPRED
RVVSGLLTRSSGGAGSNPDFELLQRLAAGGAAGRVLFHPLALGPQGPQSLYAPSTIRYAP
PELPPSHHHGIEHSDGLQLRSDHHKGPPPAFFPHLQRLAGLPPFSGFSPSDNPFSSGLPF
CMNGLRGAAGSEED
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagcgaggggaagtgtgtaagtgtggagtgggatttcctg
caaggactactggccaagccacccacccttccatgtctccagaacttgcgtaaagagaaa
tctcgcaatgcggctcgttcgcggcgggggaaggagaatttcgagttctttgagctggct
aagatgctgcctctgcccggagccatcactagccagctggacaaggcatcagtcatccgg
ctgaccatcagctacctgcacatgcgcacctttgccagccagggagacccgccctggagc
cctctgatggagggagacaacaactgcagcaaagtaagacgatcatctcattctctagcc
actgacatgtttgagcagcacctaggggcgcacctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacgtttcctctacatctcagagacagtttccatctacctg
ggactctcacaggtggagctgaccggcagcagtgtgtttgactacatccacccggcagac
cacgtggagatggcagagcggctgggaatcagtccgcatctgagggccgaggccggctgc
cacacgggccccgagagtgcgtccagctccgcatccacctcatccctggctgggacccct
gaacccgctccatctagtcctcattctcctgctgacgaacctctagaacgcggctacttc
atccgcatgaagtccaccctcactaaaagaggcctgcatgtcaagtcttctggatacaag
gtaatccacgtgacaggacgaatccgttgccaccctgcacttgtgccggtctccaaccgt
tcagtgcgtcgaccgatgggtttggttgctctggcacacaccctcccgccctccacacta
aatgaagtccgcatggagagccaaatgtttgtcttccgagtgaacatggacctacaggtc
acatattgtgagaacaggatctcagagtatatggatctgaccccagcggaggtggtggga
cacacctgttaccacttcatccatgtagaagacctggaaaacctccggcagagccatgaa
gacttgctaaggaaaggccaggtggtgaccaattactaccggtggctgcagaggagagga
ggctacctgtggatccagtccagtgccaccgtctccatcaaccacaaagccccccatgaa
cgcaacgtcatctgggtcaactacatcctgagtcgaacggagttgcccgacactcccctg
gatatactgcagctaccagagaacgtaagagcagagcgacttcgagttagctcttccccc
actgacagttccccccaggcccgaggtacgacaggctcgcaaccagtgaagagctcagtg
gggaagagtgaccccgacactaaaggcagagagaaatttacccccgctgccatccaatca
gaggacaggaggaagcgcctgctgaggtccgaccccgagggtgctcctcccgaaacccgt
cgcagactggaggagctccgtcacgcagaggagagtgtatcggcctcctccgacctggca
agcgacagcgagggggaggaggaggaagagacagagtgggaccaggggggaagcagtgac
agactgaaacaggaagacggtggaggaggtaaacagagtaggggaggagacaccccctct
agaggggagagggggagcagggtgcacaacggtcgggccgtgatccagcaactgaagagc
gtagtgaccccgtctcccctgcctggcagccccagcatcaagacagaacatgaagccctg
accaccggggggcgttgggggtcacacacacagacctcctcctcccacacacacaacgcc
cagccccaaccctcacatgcacacacaccctccagcagccccccaaaagggttgttcact
cccccttcccctgctctttcccccgccatgtccgtgtcctctccgctgccccgtgaggac
agggtggtgtcggggttgctcactcggagcagtggtggtgcaggtagtaatcctgacttt
gagctgctccagagactggctgcaggcggagcagcagggcgggtcctcttccaccccctt
gccctcggcccgcagggccctcagagcctctacgctcccagcactatccgctacgctcca
cctgagctgcccccctcccaccaccacggcatagaacacagcgatggcctgcagctacgg
tcggaccatcacaagggacccccgccagccttcttcccccaccttcagcggttggccggc
ttgccacccttcagtggtttttccccgtctgacaaccctttctcttccggcctgcccttc
tgtatgaacggactgaggggggctgcaggctctgaggaggactga
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