Anoplopoma fimbria (sablefish): 129089832
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Entry
129089832 CDS
T09102
Symbol
fbxw11a
Name
(RefSeq) F-box and WD repeat domain-containing 11-A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04114
Oocyte meiosis
afb04120
Ubiquitin mediated proteolysis
afb04218
Cellular senescence
afb04310
Wnt signaling pathway
afb04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129089832 (fbxw11a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129089832 (fbxw11a)
04340 Hedgehog signaling pathway
129089832 (fbxw11a)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
129089832 (fbxw11a)
04218 Cellular senescence
129089832 (fbxw11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129089832 (fbxw11a)
03036 Chromosome and associated proteins [BR:
afb03036
]
129089832 (fbxw11a)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129089832 (fbxw11a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129089832 (fbxw11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
WD40_like
Beta-prop_HPS5
Beta-prop_IFT140_1st
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_2
DUF6188
Motif
Other DBs
NCBI-GeneID:
129089832
NCBI-ProteinID:
XP_054453182
LinkDB
All DBs
Position
4:12757189..12772660
Genome browser
AA seq
527 aa
AA seq
DB search
MEPEMEDKTLELMNTSGMDSQNLVDDLSPKKNTVLKLSNGPVVGSRKRLSEGNYEKEKEH
CIALFDQWSEADQVEFVERLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENI
LSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNR
TSEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIIS
GLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWEVTTGEVLNT
LIHHNEAVLHLRFANGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKY
IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC
LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV
FRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaacgctggagctgatgaacacgtcagggatggactca
cagaacctcgtggacgatctgtcgccaaagaagaacacagttctcaagcttagtaatggt
cctgttgtggggtcccgcaagcgcctgtcagaggggaactacgagaaggagaaggaacac
tgcatcgccctgtttgaccagtggtcggaggccgaccaggtggagtttgtcgagcgcctg
atctcccgtatgtgccactaccagcacggccacatcaactcctacctcaaacccatgctg
cagagggattttatcactgcgctgccagcccaaggcttggatcacatagcggagaacatc
ctgtctttcctggatgcacgctcgctgtgctcggcagagctggtgtgtaaggagtggcag
agggtcatctctgagggtatgttgtggaagaagctcatcgaacgcatggtccgcactgac
ccgctttggaaaggcctgtctgagagacaccagtgggagaaatatttgttcaagaaccgc
acgtcagaagtcccacccaactcctactatcactccctgtatcccaagatcattcaagac
atagagactattgaggcaaattggcgatgtggcagacacaacttgcagaggattcagtgt
cgctcagaaaatagtaaaggggtttactgtctccagtacgacgacgacaagatcatcagt
ggccttagggacaattccatcaagatctgggataagcagtctctggagtgtctcaagata
ctgaccggtcacacaggatcagtgttgtgtcttcagtatgatgagagggtcatcgtcacc
gggtcctctgactccactgtcagggtgtgggaggtgactacaggtgaggtactgaacaca
ctgatccaccacaacgaggcagttcttcacttacgcttcgccaacggactgatggtcacc
tgctccaaggaccgctcaattgctgtctgggacatggcctctcctactgacatcagccta
cgtcgcgtccttgtgggacaccgggctgctgtcaatgtggtcgattttgatgacaaatac
attgtgtccgcctcaggggaccgtaccataaaggtatggagcaccagcacctgtgagttt
gtgcgcacactaaatggtcataagaggggcattgcctgtctacagtacagagatcgactg
gtggtcagcggctcatctgacaacacaatccggttatgggacatagagtgtggggcatgt
ttgcgagtgctggaaggtcacgaggagctggtgcgttgcattcgctttgacaacaaaagg
attgtcagcggggcctacgacggcaagatcaaggtgtgggacctgcaggcagccctggac
ccaagagcccccgccagcacattatgtctgcgcactctagtggagcactctggccgcgtc
tttcgtctccagtttgatgagtttcagatcatcagcagttctcacgacgacaccattctg
atctgggacttcctgaacgtctcgaccaatggccagtcagagggacggtctccctctcgc
acctacacttacatttctagatag
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integrated database retrieval system
