Anoplopoma fimbria (sablefish): 129089878
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Entry
129089878 CDS
T09102
Symbol
ppp2r2ba
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03015
mRNA surveillance pathway
afb04261
Adrenergic signaling in cardiomyocytes
afb04382
Cornified envelope formation
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129089878 (ppp2r2ba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129089878 (ppp2r2ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129089878 (ppp2r2ba)
09158 Development and regeneration
04382 Cornified envelope formation
129089878 (ppp2r2ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129089878 (ppp2r2ba)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129089878 (ppp2r2ba)
03036 Chromosome and associated proteins [BR:
afb03036
]
129089878 (ppp2r2ba)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129089878 (ppp2r2ba)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129089878 (ppp2r2ba)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129089878 (ppp2r2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
WD40_Gbeta
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
129089878
NCBI-ProteinID:
XP_054453253
LinkDB
All DBs
Position
4:complement(8566400..8603818)
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPSTILSSTCHTEADIISTVEFNSSGELLATGDKGGRVVVFQREQES
KSQPQRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNLKDDDGRIRDPSTITSLRVPVLQPMDLMVEATARRVFSNAHTYHIN
SISVNSDLQTYISTDDLRVNLWNLEITDRSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMREAALCDKHCKYFEEPEDPSTRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPLETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctccgagcaccatcctgtct
tccacttgccacaccgaagctgacattatctcaacggttgagtttaactcatcgggggag
ctgttggccaccggggataaaggaggcagagtggttgtcttccagagggagcaggagagt
aagagccagccccagcgtcgaggggagtacaatgtttacagcacattccagagccacgag
ccagagtttgactacctgaagagtttggagattgaggagaagatcaacaagatcaaatgg
cttcctcagcagaacgccgcctacttcctgctctccaccaacgacaagacggtgaagctg
tggaaaatcagcgagagagacaagcgtccggagggctacaacctgaaggatgacgatgga
cggatcagagacccgtcgaccatcacctcgctacgggtgccggtattgcagcctatggac
ttgatggttgaggctacagccaggcgtgtattcagcaatgctcacacctaccacatcaac
tccatctccgtcaactccgaccttcagacatatatctccaccgacgacctcagggtgaac
ctgtggaacctggagatcaccgatcgcagcttcaacattgtggacataaagccggccaac
atggaggagctgacggaggtgatcacctctgcagagtttcatccccagcagtgtcacacc
tttgcctacagcagcagcaagggctcaatacgcctctgtgacatgagagaggctgcgctc
tgcgacaaacactgcaaatactttgaggagccagaggatccctccactcgctcctttttc
tctgaaatcatctcatccatctctgacgtgaagttcagccacaatggccggtacctgatg
acaagagactacctcactgtcaaggtgtgggaccttcaaatggagaacaaaccactagag
acataccaggtgcatgactatttacgtggcaaactctgttctctgtatgagaacgactgc
atctttgacaagtttgagtgtgtctggaacggatcagacagcgtcataatgaccggctcc
tataacaatttcttccgaatgtttgaccggaacactaaacgtgacgtcacactggaggcg
tccagggagaacagcaaacccagagccattctgaagccgcgcaaggtgtgtgtaggtggg
aagcgtcgtaaggatgagatcagtgtcgacagcctagacttcagcaagaagatccttcac
actacatggcacccgcacgagaacatcatcgcagtagcggccaccaacaacctctacatc
ttccaagacaaggtcaactaa
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