Anoplopoma fimbria (sablefish): 129089880
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Entry
129089880 CDS
T09102
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129089880 (ssrp1a)
03036 Chromosome and associated proteins [BR:
afb03036
]
129089880 (ssrp1a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
129089880 (ssrp1a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
129089880 (ssrp1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
PDU_like
Motif
Other DBs
NCBI-GeneID:
129089880
NCBI-ProteinID:
XP_054453259
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All DBs
Position
4:14035353..14048915
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AA seq
717 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDNIQAGELNMAQWRRVCLGH
GIKLGTNSGLVYKYDGFRDTDFEKISEFFKSNYKVELTEKDMCVKGWNWGTAKFSGPLLS
FEVNDSTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAENVLCKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLSLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKSLVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSEESDGESDES
FNPGEEDDDIAEEYDSNASASDSSDDGDDSDDDGSKKKKVKKAKVVKEKKERKPRKEKKK
RKDTGGPKRPMSAYMLWLNASRERIKSENPGISITEISKKAGEMWRQLGKDDKEEWDIKA
GEAKRQYDKAKKEYKESGAGAAAAAAAAAAATSTSSSKKESKKSGGKKEEKKRKSSGGDK
EKERGGANDSFKSREFIETSEESSSDSERKSKSKRKKESDEEEEAVSTPASSEEESD
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcagcgacatttaccaggaggtcaaagggtcctggaatgat
gggcggctgcgtttcagcaaacaaaatgttgtttataagagcagcaagacggggaaggtg
gacaacatccaggctggtgagctcaacatggcccaatggaggcgagtgtgtttaggtcac
ggcatcaagttgggcaccaattcaggacttgtctacaaatatgacggcttcagggatacg
gactttgagaagatatctgagtttttcaagtccaactacaaggtggagctgacggagaag
gacatgtgcgtgaagggatggaactggggaacagccaagttctcggggccactgttatca
tttgaagtaaatgacagtacagctttcgaggtcccactgtccaacgtgtcccaatgcgcc
acggggaagaacgaagtcacgctggagtttcaccaaaacgacgacaccgaggtctccctc
atggaggtccgattctacgtcccgcccagccagactgatgaacgacaagaccctgtggag
gcgtttgccgagaatgtgttgtgtaaggccgatgtgatccaggccacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatacgacatccgtatctac
ccgacttttcttcacctccatggtaaaacatttgactacaagattccctacaccaccgtc
ctccgtcttttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacacgttatcactttctcatcctgcttttctccaag
gaggaggacctcagcctcaccctcaacatgagcgaggaggacgtggagcgccgttttgag
ggcaaactcagtaaaaacatgtcaggctctctgtatgagatggtgagcagggtgatgaag
tccctggtcaaccgcaagatcactgtgcccggaaacttccagggtcactccggggctcag
tgcattacctgctcctacaaggcgtcctcaggcctcctctatcctctggagaggggcttc
atctatgtccacaagccccccgtgcatctgcgcttcgaggagatctcctgcgtcaacttt
gccagaggcaccactacaacgagatcctttgactttgagatcgagaccaagcagggaaat
cagtacaccttcagcagcattgagagagaagagtacggcaaactgtttgactttgttaac
gccaagaagctcaacatcaagaacagaggcttcaaagagggcatgaagggtaagattgac
gagtacagtgactcggacgacgaccagcatgatgcctacctggagaggatgaaggctgag
ggcaagatcagagaggagggcaacgacagcgaggaatcagatggcgaaagcgatgagtcg
ttcaaccccggagaggaagatgatgacattgcagaagagtacgacagcaacgcgtcggcg
agcgacagcagcgacgacggggacgatagcgatgatgatggctcaaagaagaagaaggtc
aagaaagccaaagtggtgaaggagaaaaaggaaaggaaaccacgcaaagagaagaagaag
cggaaagataccggcggccccaagaggccgatgagcgcctacatgctgtggctcaacgcc
agccgcgaacgcatcaagtctgagaaccccggcatctccatcacagagatctccaagaag
gccggagagatgtggagacaactgggcaaagacgataaggaggagtgggacataaaggcg
ggagaggcgaagaggcagtatgacaaagcgaagaaagagtacaaagagagcggcgctgga
gcagcagcagcagcagcagcagcagcagcagcaacatcaacatccagttccaagaaggag
agtaaaaaatctggaggtaagaaggaggagaagaagaggaagtcttctgggggagacaag
gaaaaggagcggggaggagccaacgacagcttcaagagtcgagagttcatcgagacgagc
gaggaaagttcttcagactccgaacgcaagagcaagtccaagaggaagaaggaatcagat
gaggaggaagaagctgtttccacacctgccagctcagaggaagagtctgactaa
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