Anoplopoma fimbria (sablefish): 129089888
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Entry
129089888 CDS
T09102
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129089888 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129089888 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129089888 (hars)
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
129089888 (hars)
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
129089888 (hars)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129089888 (hars)
Prokaryotic type
129089888 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
129089888
NCBI-ProteinID:
XP_054453273
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All DBs
Position
4:5091053..5099133
Genome browser
AA seq
517 aa
AA seq
DB search
MLGMFCVRAGSGLMGFRAAPRVRSLHSLPGITVAQIDEEVAKLLALKAQIGGDDGKHQFV
LKTAKGTRDYNPKQMAIRERVFSTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKLIY
DLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCD
FDIAGQYDAMIPDAECLKIVHEILSGLDLGDFRIKVNDRRILDGMFAVCGVPDDKFRTIC
STVDKLDKMPWEDVRKEMVNEKGLSEEAADHIGEYVSLQGGMDLAERLLQDQKMSQSKQA
CAGLSDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEAVLTQAGVSSEAQNGAPA
EESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAEKVRTTE
VQVMVASAQKNLLEERLKLVTELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLVAIMGE
QELKDGVVKLRVVATREEVDISRAALVDEIRRRTSEA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatgttttgtgttcgtgctggctctggtctgatgggcttccgggctgcacca
cgtgtccgatctctgcattctttacctgggatcactgtggctcagattgatgaagaggta
gccaaactgctggcgctgaaagctcagataggaggagacgatggcaaacatcagtttgtc
ctcaagacggcaaagggaacgagggactacaaccccaagcagatggccatcagagagaga
gtcttcagcaccatcatcggctgcttcaaacgccacggagcagaaaccatagacacacct
gtttttgaactgaaggaaacgttaacagggaagtatggagaggattccaagctcatctac
gacctgaaggaccaaggaggagagctgctgtccctcagatatgacctcactgtgcccttt
gcccgctacctggcgatgaacaagataaccaacatcaagcggtaccacatcgctaaggtc
taccgccgcgataacccagctatgactcgcggacgctacagggagttctaccaatgcgac
tttgacatagcagggcagtatgacgccatgattccagatgcagagtgtctgaagattgtc
catgagatcctcagtgggctggacctcggagacttccggatcaaggtcaacgacagacgc
attcttgatgggatgtttgctgtgtgtggtgttccagatgacaagttccgcaccatctgt
tcaacagtggataaactggacaagatgccctgggaggacgtgaggaaggagatggtgaat
gagaagggcctgtcagaggaggcagcagaccacattggggaatacgtcagtttacaaggt
ggaatggacttagcagagcgcctccttcaggaccagaagatgtctcagagtaagcaggcc
tgtgctggtctgtcggacatcaagctgctcttcagctacctgcagctcttccaggtcaca
gacaaggtggtgtttgacctcagtctggctcggggtctggactactacacaggaatcatt
tacgaggcggtgctgactcaggcgggtgtgtccagcgaagcccaaaacggggcacccgca
gaggagagtgtgagcgtgggcagcgtggcgggcggcggccgatacgacggcctggtgggc
atgtttgaccccaaggggaggaaggtaccgtgtgtgggcgtcagcatcggcatcgagagg
atcttctccatcatggagcagaaggctgaggcctcagcagagaaggtccgcaccactgag
gttcaggtcatggtggcgtcggctcagaagaacctgctggaggaaagactcaaactggtc
actgagctctggaatgctggcattaaggcagaggtgatgtacaagaagaaccccaaactg
ctgagtcagctgcagcactgcgaggagtctgggatccccctggtggccataatgggagaa
caggagctgaaggatggagtggtgaaactccgcgtcgtggccaccagagaggaggtcgat
atctccagagcagctcttgtagatgagatcaggaggaggacctctgaggcctag
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