KEGG   Anoplopoma fimbria (sablefish): 129089889
Entry
129089889         CDS       T09102                                 
Name
(RefSeq) protein Atg16l2
  KO
K20868  autophagy-related protein 16-2
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129089889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129089889
   03029 Mitochondrial biogenesis [BR:afb03029]
    129089889
Membrane trafficking [BR:afb04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    129089889
 Others
  Specific organelles associated proteins
   Auto phagosome
    129089889
Mitochondrial biogenesis [BR:afb03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    129089889
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 WDR90_beta-prop_4th ATG16 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT122_1st PALB2_WD40 Ge1_WD40 Cytochrom_D1 Beta-prop_RIG_1st Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 129089889
NCBI-ProteinID: XP_054453278
LinkDB
Position
1:complement(1038178..1054313)
AA seq 567 aa
MGQLKHRDLNQHDQHQDLILLYTRLLEKTSLTKGILRESTRSPSSDSSCSVLSLLHQNNQ
LKKKTGELAYQVLELQQKVKDKELVLEEQRSSLLEVSRRLEGAFDSRQELQRQVEKVQEE
NGSLKTKYDNLLERQRREETKLREEKVKGDHLLENMIGPKQQAAARMNNRNQRRSRAREA
NLQKELQTAAGSKVTLDSCSSAPSSRSTSPKSPESRDGGHARLFRSSSVSSPRILSSIRE
LFQKRRGHSVCSLEEDQVFPVRISLSARVPVRALQVLEAHEQGINAVRFSSCSQLLATGG
TDRQVKLWEVRAGSLTHRASLDGGTEGITCVEFDAAGSRILASSYDRSALLWRLDDSVPK
WTLTGHSRKVTAARFSGCLHQVVTGSADRTIRLWDLQRAACVQVVAVPSYCSDLVCSENF
IISGHFDSKIRVWDTRTLRCVQELPAQGKVTSLDISSDQRQLLSCCRDDCLQLVDLRGRS
NDRVCFRAEGFTCGSDSTKAVISPDGCFLAAGSADGAVYIWNVSTGNLETRLPDRHSSSI
SAVAWSLSGEYVVSVDRSRLAVLWSDI
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgggtcagctgaagcaccgagacctgaaccagcacgaccagcaccaggacctgatcctc
ctctacactcggctgctggagaaaaccagcctgaccaaaggaatcctgagagaatccacc
aggagtccctcctctgacagcagctgctccgtcttatctctgcttcaccagaacaaccag
ctgaagaaaaaaacaggagagttggcctatcaggtgttggagctgcagcagaaggttaaa
gacaaagaactcgttctggaggagcagcgttccagtctgctggaggtcagtcggcggctg
gagggtgcgtttgattctcgtcaggagctgcagcggcaggtggagaaggttcaggaggag
aacgggtcgttgaagacgaagtacgacaacctgctggagcgtcagagacgggaggagacc
aaactccgagaggaaaaggtcaaaggggatcatctgctggagaacatgatcggccccaaa
cagcaggccgccgcccgcatgaacaaccgcaaccaacgccgctccagagctcgagaggcg
aacctgcagaaggagctgcagactgctgctgggtcaaaggtcaccctggacagttgttcc
agcgctccgtcctccagatcgacatctccaaagtctccagagtccagagacggaggacac
gccagactgttcaggtcttcatcggtttcgtctccgaggatcctctcgtccatcagagaa
ctctttcagaagaggcggggccactctgtctgcagtctggaggaggatcaggtgtttcct
gtcaggatcagtctgtcggcccgagtacctgttagagcgctgcaagtactggaggcccat
gagcagggcattaacgctgtgaggttcagctcctgctctcagctgctggcgacgggaggg
acagacagacaggtcaaactgtgggaggtccgagcaggctcgctgactcacagggcgtct
ctggacggcggcacagaggggatcacctgcgtggagttcgacgccgcgggtagcaggatc
ttggcgtcctcctatgataggtcggccttgctgtggcggttggatgactccgttcccaag
tggactctgacgggtcacagcaggaaggtgacagcagcgaggttcagtggttgtctccat
caggtggtgacgggcagcgcagacagaaccatcagactgtgggacctgcagagagccgcc
tgtgtccaggtggtggccgtgccgtcttactgcagtgatctggtttgttctgagaacttc
atcatcagtggacactttgactccaagatcagagtctgggacaccaggacgctccgctgc
gttcaggagcttcccgctcaggggaaagtcacgtcgctggacatcagctccgaccagcgt
cagctgctcagctgttgccgtgacgactgcctccagctggtcgacttgagggggcggagc
aacgaccgcgtgtgcttcagagcggagggctttacatgtggcagcgacagcaccaaagct
gtgatcagtccagacggttgttttctcgctgccggatcagctgacggtgccgtttacatc
tggaatgtttccaccggcaacctggagacccgcctacctgacagacacagttcgtccatc
agtgccgtggcctggtctctgtccggtgaatatgtggtcagtgtggaccggagtcggctg
gccgtcctctggagtgacatctga

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