KEGG   Anoplopoma fimbria (sablefish): 129089937
Entry
129089937         CDS       T09102                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129089937 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afb03041]
    129089937 (rbm22)
Spliceosome [BR:afb03041]
 Complex B
  Other components
   Prp19-related factors
    129089937 (rbm22)
 Complex C
    129089937 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded Nup35_RRM_2 zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_12 zf-CCCH_PARP12 zf-CCCH_10
Other DBs
NCBI-GeneID: 129089937
NCBI-ProteinID: XP_054453340
LinkDB
Position
4:complement(12069382..12074633)
AA seq 427 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGELKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAV
MNIALPPPPGINPPPPGFGPPMFHPMSHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGARHGE
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcgacgtccctaggatccaacacctacaatagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgcttaggagaaaacccttacatccgcatgaccaaggagaag
tatggcaaagaatgcaagatttgtgcgcggccatttactgtgttccgatggtgtccgggg
actcgaatgcgtttcaagaaaacagaggtctgtcagacctgcagtaaaatgaaaaatgtt
tgtcagacatgtctgctggacctggagtatggtttgcctattcaggtcagagacactggg
ctatcagttaaagatgaggttcctaagtcagatgtgaacaaggagtactacacacagaac
atggagagagagatagccaatactgatggcacacggccagtgggtcagttgggtaaagcg
cccagctctagtgatatgttgctgaagctggcccggaccactccatactacaagaggaac
aggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tataggcacgagaagcccacagatcctgatgatcctctagccgaccaaaacataaaggac
cgttactacggcatcaatgacccagttgcagacaagctgctgaaacgggcctcaactatg
ccccgactggacccaccagacgacaagtccatcagcaccctctacatagggggtttggga
gataccgtcactgatggagagctcaagagtcacttttaccagtttggcgagattcgcacc
attaccatagtccagaggcagcagtgtgccttcatccagtttgccactcggcagtcagct
gaaatggctgctgagaagtcattcaacaaactcatcattaatggacgcagactcactgtc
aagtggggaaggtctcaggcagcaagagggaaggaaggtatcaaagatggcgtcagtgag
atgggcaccagacttgacccagtacctgggctgcctggtgctcttcctccaccaccagct
ttggatgaagaagctcctgcaaactacttcaacctggaccctagcagctctcctgcagtc
atgaacattgctctgcctccacctccaggcatcaacccgcctcctccaggttttggccct
ccaatgtttcaccccatgagtcacatggctccacctatgccccctccaatgagcatgaga
ccacctggtcaaatccactacccctctcaggatcctcagcgcatgggtgctcacgctgca
catggcgctcgtcatggtgaatag

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