Anoplopoma fimbria (sablefish): 129089947
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Entry
129089947 CDS
T09102
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129089947 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129089947 (rsf1a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
129089947 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
DUF3221
Motif
Other DBs
NCBI-GeneID:
129089947
NCBI-ProteinID:
XP_054453358
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All DBs
Position
1:29283628..29306189
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AA seq
1478 aa
AA seq
DB search
MAAPLVARSSGPALCSSFAEVCSFLERFGAVLDLPEITFPQMERYLRDTKTVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQEMSMECKSCILKYLCECQF
DDNMKFKVAINEEEPEKMRLQPIGRDQQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLAEALELLKAQVEPKPNPDEDQNQNQAGSRSTSPTEKDEVVEAIGSPKPSRTAE
EHTDSEKVDPVKEEEPLTKVVKLEETQPPKQENTEAELKEEKTDSKSQPVFDNRVSTITT
VIKSELRDTDAPKNAVSVVMAPVATVPKLEPIKEGQAERSVVRSNQQAKIPLKKRELKIA
ESYHSNHLNNSNNSNSSSIIVCNPSVIQTKDSHGKEGKLPSSLAPPGGPATSQPQQLVVT
ASRQELSNGRTFPPLLHKEGQNGVIGVIGQVGVVSHVGVIRSPSERHRAPGAEQQEQNGP
SSDQRDSRAEQEEREVSRQSVLVRKGPVEGEAAVAAATALPPPPVLMDAQTVRQLPSPPS
LKSDPLPEAVGRKVVSVSLSPLSLSLEDPKGQTAGDLGEKTTEEESDRGTKTGSCEQTDD
KERSSVVSCCPLAEEGGKDDHKMNTITLGKFEAESVSTAPPLEADQQDTKDHHGEGVNGG
PAAQVRVKDTGLVSGERQGPLEEASSELQKEGIRLKIKIPPHRRNKLKGRGGKEGEKERE
QEAQEDGRLLRRSARICRSSALPTCRPSSKVAESQRKKLQKKQALPSRMREGDEEEEGEE
EEEERISSAKKDGRTEPVGQIRKQRGKRRHRRPRWSNIRAKRRKPNEGEEAEGRGRKQGE
GESEGGSDSEESCKSEEIPSEDACSHCGLPNHPELILLCDSCDNGYHTACLRPPLMLIPD
GEWFCPPCQHKLLCEKLEEQLQNLDSALKKRDRAERRRERLVYVGISVENIIPEGDEGEE
EKTTKKKDPKKSKNLGRRSTRTRKHISYRFDDFDDAIDEAIEEDFRDLVGGAGRGRDIAA
ILSEEGGKGSQRPIRSQAISARNRKRRRLNDLESDSTAAESEDEFMLSNSSEDEEFGVSG
PEDEEVEDEDAGSYAGSANSGSRPKRAVRGVPKQRLSKTQRRKRPRRRRRRSSEEEEEDS
EEEMASDQYSDMTDSDAERKRRGLRRGQRQQVNYRETSESSDNSRASAKKVKVRPRGRPR
KEHLSSDFSDASPSSRDTEEEDDYEDEEEDDHRRRVKKRKREEEDLGRNRVRQKRRRHDE
DEERHRGRRLKSKLLEREKTDRDKTRRLKRTEREEEEDPEKMGRGKRREILSQQRRKRLD
QMLKKRRPSTDEEDEDDSEESETSSSEEDRPIRKRLNRIDSDDDEEEDAEKEEEEEEEER
RQKKATVKKSLAVERRADSDAQEKGRGRSPSPPNRHQTSRGPEKPGAGSPTGPRDSEGSD
GQGRHNGPSHQEEEEEEQGEEEEGQTDSLNSAQNSPQS
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccgctggtggcgaggagctccggcccggcgctctgctccagcttcgcggag
gtctgctcgttcctggagcggttcggagccgtgctggacctgcccgagatcaccttcccg
cagatggagcgatatctacgggacacaaagacagttcctaaaccccttgtggagctccac
gtgaagctgctcagaaaactggggaggtctgtgactactgaccgctgggaaaaatacttg
gctaaggtttgccaggagttgaacagtacctgggcatgggagctggaacagaagggctac
caggagatgtccatggagtgcaagtcatgcatcctcaaatatctctgcgagtgtcagttc
gacgacaacatgaagttcaaggtggcgatcaatgaggaggaaccagagaagatgcgtctg
cagcccatcggtcgggaccagcagggcctgatgtactggcttcagctggaccaggagcag
aacatccggctgtacacggaggagcaggacgatctggacggatccacttggaagtgcatc
gtcaggactcgtaacgacctggccgaggctctggagctgctgaaggcccaggttgaacca
aaaccgaatccggatgaggaccagaaccagaaccaggctggttccagaagcaccagccct
acagagaaagatgaagtggtagaggccattggaagccccaaaccctccaggaccgctgag
gaacacactgacagtgagaaggtcgaccctgtgaaggaggaggaacccctgaccaaagtg
gtgaagctggaggagacgcagccccccaagcaggagaacactgaggccgagctgaaagag
gagaagacggacagcaaatcacagcccgtcttcgacaaccgcgtcagcaccatcaccacc
gtcatcaagtcggaactcagggacacagacgcccccaaaaacgctgtgtctgtcgttatg
gcaccagtcgcgactgtgccaaaactggagccgatcaaggaagggcaggcggagcggtca
gtcgtcaggagcaaccagcaggccaagataccactgaagaagagggagctaaagattgca
gagagctaccacagcaaccacctcaacaacagtaacaacagtaacagcagcagtattatt
gtgtgcaacccttcagtgatccagaccaaggacagccacggcaaagaggggaagttgccc
agctcgttggcgccccctggtggtccggctacctcacagccgcagcagctggtggtcacc
gcatcgaggcaggaactgagcaacgggagaacattcccccccctgctgcacaaagaggga
caaaacggagtcataggggtcataggtcaagtcggggttgtaagtcacgtgggggtcatc
cgcagcccatctgaacgtcacagagccccaggtgcagagcagcaggaacagaatgggccc
agttcagaccagcgggactccagagctgagcaggaagagagggaggtcagccggcagtca
gtgctggtcaggaagggacctgtcgaaggggaggcggcggtggcggcagccactgctctt
cctcctcctcctgtgttgatggacgctcaaacggtcagacaactaccgtcaccgccatcc
ttaaaatctgatccgcttccagaagctgtagggagaaaagtggtttcagttagtctttcc
ccactgtctctgtccctagaggaccccaaaggacagacggcaggagacctgggtgaaaaa
acaacggaggaggagtcagacagggggacgaaaactggaagttgtgaacagacagatgac
aaagagaggagcagtgtggtgtcttgttgccctttggcagaagaaggaggtaaagatgac
cataaaatgaatacaatcactttaggaaagtttgaggcagaatctgtgagcaccgctccg
cctctggaagcggaccagcaggatacaaaggaccaccatggagagggggtcaacggcggg
ccagctgcccaggttagggtgaaggacactgggcttgtatcaggggagaggcagggtccc
ctggaggaagcctcctctgagctccagaaagaaggaatcaggttgaagatcaagattccc
ccccaccggagaaacaagttaaaggggaggggggggaaggagggggagaaggagagggag
caggaagcacaagaggacgggaggttgctgaggagatctgcaaggatttgccgatcatct
gctttgccaacctgcaggccgagctcaaaggtggctgagagccagagaaagaaattgcaa
aaaaaacaggcactgcccagcagaatgagggagggagatgaggaggaggagggagaagag
gaggaagaggagaggatctcatctgcaaagaaagacggcagaacagaacctgttgggcaa
attaggaaacagaggggtaaacggaggcaccggcgcccaagatggtccaacattcgtgcc
aagagacgcaaaccgaacgagggagaggaagcggagggcagggggaggaagcagggggaa
ggggagagcgagggagggagcgactcggaggaatcgtgcaaatcggaggagattcccagt
gaggacgcctgcagtcactgtgggctgcccaaccaccccgaactgatcctgctgtgtgac
tcctgtgacaatggataccacacggcctgtctgcggccgccgctcatgctgatcccagac
ggagagtggttctgtcccccatgccagcataagctgctgtgtgagaaactggaggagcag
ctgcagaacctggacagtgctctgaagaaaagagatcgagcagagaggaggagggagcgg
ctggtgtacgtgggaatcagtgtggagaacatcatccctgagggagatgagggtgaagag
gagaagacgacaaagaagaaagatcctaaaaagagtaaaaatctggggaggagatcaacc
agaaccaggaagcacatcagctacaggtttgatgactttgacgatgccattgatgaggct
atagaggaggacttcagggacctcgttggaggagcagggcgaggccgagacatcgccgcc
atcctgtcagaggaaggagggaaggggagccagcggccaatcaggagccaggctatctct
gccaggaacaggaagaggcggagactgaacgacctggagagtgacagcacggctgcagag
agtgaggacgagttcatgctcagcaacagctctgaggacgaggaattcggcgtgtcaggg
cctgaggatgaagaggtggaagacgaagacgcgggcagctatgccggcagcgcaaacagt
ggatcccgccccaaacgggcggtgaggggggtgcccaagcagcgactcagcaagacccaa
cgcaggaagaggccgaggcggcggcggagacgctcctctgaggaagaggaggaggacagc
gaagaggaaatggcctcagatcagtacagcgacatgaccgacagcgacgctgaaaggaag
aggcggggcctcaggcggggccagcgccagcaggtcaactaccgcgagacgtccgagtcg
tcggacaactcccgggcctccgccaagaaggtcaaggtcagaccccgcggcagacctcgt
aaggagcatctctccagcgacttcagcgacgcgtcgccttcttcccgagacacggaggag
gaggatgattatgaggatgaggaggaagatgaccacaggagaagagtgaaaaagaggaaa
agagaggaagaagacctcgggagaaacagagtgagacaaaagcgaaggagacatgatgag
gacgaggagcgccatagagggaggcggctgaaaagcaaactcctagagcgagagaagacg
gacagggacaagacgaggcggctaaagaggacagagagggaggaggaggaggacccggag
aagatgggcagggggaagaggagagagatactgtcgcaacagcgccgcaagcgtcttgat
cagatgctgaaaaagaggcggccttcgacggacgaggaggacgaggacgattcagaggag
tcggagacttcttcatcagaagaggatcgtccgatccgcaaaagactcaaccgcatcgac
tccgatgacgatgaagaggaagacgcggaaaaggaggaggaggaggaggaggaggagagg
aggcagaagaaggcgacggtgaagaagtctttagcggtggagaggagggccgacagcgac
gctcaggaaaaggggaggggccgtagcccgtctccgccaaacagacatcagacctccagg
ggtccggagaagcctggggccgggagtcccaccgggcccagggacagtgagggatcagat
gggcagggcaggcacaatggcccctctcatcaggaggaggaggaggaggaacagggagag
gaggaggagggccagacagactcattaaactctgcccagaacagtccacagtcgtga
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integrated database retrieval system
