Anoplopoma fimbria (sablefish): 129089997
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Entry
129089997 CDS
T09102
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04060
Cytokine-cytokine receptor interaction
afb04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129089997
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
129089997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129089997
04090 CD molecules [BR:
afb04090
]
129089997
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Tumor necrosis fators
129089997
CD molecules [BR:
afb04090
]
Proteins
129089997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
ThiF
Motif
Other DBs
NCBI-GeneID:
129089997
NCBI-ProteinID:
XP_054453430
LinkDB
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Position
4:complement(9933846..9936533)
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AA seq
264 aa
AA seq
DB search
MLYNALLSLAAFMFCLSLFLVHRASVLENDFRKLQGDITLQLNQPRSEGVNGKMAKMSKT
REDIKLSTLQKAQSSLKISSRRVKRQQGSCRGPTSFLQLTANTNKQPDIRGNITVIPWTV
SAQQGNAISQKENRIVVQEDGYYLVFGQVWCHCNSSITKLILHLICSNCSADVLLNSQVF
FKSPSTVMGHIIQSWGSTGTGTTSTELLHCLQEMPDENPANTCYTAGIVQLHQDDELELV
VPYRPHAIISMDAEFTFFGVIQLN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaatgctttattatcactagcagcatttatgttttgtcttagtcttttcctg
gtccacagagccagtgttttagaaaacgattttcgcaaactccaaggggacattactctt
caattaaatcagccacgttctgagggagtcaatgggaaaatggccaagatgtctaaaaca
agggaggacataaagctaagtactttgcaaaaagctcagagttctctgaaaatatcttcc
aggagagtaaaacggcaacagggcagctgcagagggccaacatcattcctgcagttaaca
gctaacactaacaaacagccagacataagaggaaatataacagtgatcccctggactgtt
tctgcgcagcaaggaaatgcaatttcacaaaaggaaaacagaattgttgtccaagaagat
ggatattacttggtgtttggacaagtatggtgtcactgtaactcaagcataactaaattg
atattacatctaatttgttccaactgttctgctgatgttctgcttaattcacaggttttt
ttcaaaagcccaagtacagtcatgggtcatatcattcaaagttggggttccactggaacg
gggacgacatcaacagagctcttgcactgcctgcaggagatgcctgatgaaaatccggcc
aatacttgctacactgcaggcattgtgcagctgcatcaggacgatgagctcgaactggtg
gtaccatacaggccccatgccatcatctctatggacgcagagttcacgttttttggtgtt
atacaactaaactga
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