Anoplopoma fimbria (sablefish): 129090050
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Entry
129090050 CDS
T09102
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04060
Cytokine-cytokine receptor interaction
afb04068
FoxO signaling pathway
afb04110
Cell cycle
afb04218
Cellular senescence
afb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129090050 (tgfb5)
04350 TGF-beta signaling pathway
129090050 (tgfb5)
04068 FoxO signaling pathway
129090050 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129090050 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129090050 (tgfb5)
04218 Cellular senescence
129090050 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129090050 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129090050 (tgfb5)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Transforming growth factors (RSTK binding)
129090050 (tgfb5)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Growth factors/receptors
129090050 (tgfb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DAN
CBM96
Motif
Other DBs
NCBI-GeneID:
129090050
NCBI-ProteinID:
XP_054453510
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Position
4:15655694..15664236
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AA seq
420 aa
AA seq
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MWLPRLAALLLLLRFSGVLLVEGFNTCHSINLDAQKSRRIEAVRGQILSKLRIRSPPAKD
EAPSPGSVAPEIMLLYNSTRELLKERARQAESACERESSEEDYYAKEVQRIDMLPPRTDT
NAVQPVTPDPHYRVVHFDVSGVDLTNSTLVKAEFRIFRAPNPQARASEQRVEIYQLLKPD
EESTSTQRYIDSRTVQPKTKGAWISVDVTETIKDWVSDPENNLGLKLGIHCPCCTFVPST
NNIVPNKSEELEALFAGVDDELLRQLRKPGQVKGQADFSTKTPHLILTVLPSERVDNPTK
KNRKKRAAATETKTCSRGSDQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFCSGNCPYIW
SANNHYNMILPLYNKLNPEASASPCCVPQDLEPLTIMYFIGRTPRVEQLSNMVVKSCKCR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcccccgtctggcggcgctgctgctgctgctccggttctccggtgtgttgttg
gtggagggcttcaacacgtgccactccatcaacctggacgcgcagaagtcccggcgcatc
gaggcggtccgcgggcagattctcagcaagctccgcatccgcagcccgccggccaaggac
gaggccccgtcgccgggctccgtggccccggagatcatgctgctctacaacagcacgcgg
gagctgctgaaggagcgcgcgcgccaggccgagtccgcgtgcgagcgcgagagcagcgaa
gaggactattatgccaaagaggtgcagaggatcgacatgctgcccccccgcaccgacaca
aatgcggtgcagccagtgacccccgacccccattacagagtcgtccacttcgacgtcagt
ggcgtggacctgaccaacagcaccctggtcaaggctgagttcaggatcttcagagctccc
aacccgcaggcccgggcttcagagcagagagtggagatctatcagctgctgaagccagat
gaagagagcacctccactcaacgttacattgactcccgcaccgttcagccgaagacgaag
ggagcatggatctctgtggacgttaccgaaaccattaaggactgggtgtcagatccagag
aacaatcttggcctgaagttgggcatccactgtccgtgctgcacatttgtcccgtcaacc
aacaacattgttcccaacaagagtgaggagctggaggctctctttgcaggtgttgatgac
gagctgcttcgtcagttgagaaagcccggtcaggttaaaggccaggcagatttcagcacc
aagacgccgcacctcatcctcacagtgctgcccagcgaaagagtggacaacccgaccaag
aagaaccgcaagaagagggcggccgccacagaaaccaaaacctgctcccgtggctcagac
cagggctgctgcctgcgctcgctctacatcgacttcaggcgggacctcaactggaagtgg
attcacgagcccaaaggttacaaagccaacttctgttccggcaactgcccttacatctgg
agtgccaacaaccactataacatgatcctgcccctgtacaacaagctgaaccctgaggcc
tccgcctcgccctgctgcgtccctcaggacctggagcccctcaccattatgtacttcata
ggccgcacaccgcgtgttgagcaactctccaatatggtcgtcaaatcctgcaagtgccgc
tga
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