Anoplopoma fimbria (sablefish): 129090062
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Entry
129090062 CDS
T09102
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129090062 (prom1a)
04090 CD molecules [BR:
afb04090
]
129090062 (prom1a)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129090062 (prom1a)
CD molecules [BR:
afb04090
]
Proteins
129090062 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Cyt_bd_oxida_II
DUF3587
Motif
Other DBs
NCBI-GeneID:
129090062
NCBI-ProteinID:
XP_054453530
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Position
4:22419632..22493802
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AA seq
882 aa
AA seq
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MWKTGIFLLLWVFLASGELQQETEPRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILFH
MVRTFLCAVQPNAFPQDLIVKLAKDKFGAIQTEYQKAIYYELGFLICAAVGLLFAVLVPL
SGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFATSLLITMGVLCAYAANQNLSS
QVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATAKNKVIYDLDNIGPLLGGRIHDQL
DKEVRPALDRVLNIAGAMRETKEALENVGVALEVLQEGTGKLNFNLSVVRTSINRTLNDP
GCHDEKSDATSAQLCRNIRQSLSQLQIGANYTRLPKVTAQLEKVNDVLRTDLSAIVQRGY
ASVNDTPHMVVEQTRSVVESVRGLVDGIGNNISSFSKVFPVQSSLSNFTIFISHAHAKIE
DHYPEIDKMDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPTTRGCISNTGGT
MLMAGVGFTVIFSWVLMGVVTIIFLAGGNMEKLFCEPFHTKEVFKVVDTPYLVNPDWKNF
IPGYMYNDSDLELTSESLYSTCKENKGIYSAMRLDKVFNISLFLNTTVFTKDVVSQLDSV
KIDLRGIILLEAEGKQNLMDFSEAGLSEINYADYLEEVNKGVTVVDLLSFARDLEAQTDL
MPRGVLQTALKGHAGTLRQIHSQQIISMEQAMSALNQSMRFLERTATDLPNKVLAVLDAI
EAAQYLISQNATNLINRETGKYKATIVGYFHQYIEWVKTSLALEVAPCKPFSNMLDTAEI
IACSFLVDSMNTFWMGLGCSTLFLFPSIILAVKLAKYYRRMDTEDVYDDIETIPMKTMEI
GNNGYHSENPQGIPNPMMTSVPTYDTMNRFPRASAPPRHIDW
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaccgggatcttcctgctgctgtgggtgttcctggcgtccggagagctccag
caggagacggagccccggagactccctccgccggggaagttggacttcggttatgtgcct
gcgggagtttacgagaccctggcccactacgaaccgggacccatagggatcctgttccac
atggtgcgcacctttctctgtgcggtgcagcccaacgcgttcccgcaagatctgattgtc
aaactggcaaaagacaagtttggagccattcagacggaataccaaaaggccatctactac
gagctaggcttcctaatatgtgcggcggtcggcctgctgttcgccgttctggtgccgtta
agcggcctcttcttctgcatgtgccgctgctgtgacaactgcggcggcgagatgcaccag
cgccagaggaagaacgcagattgccggcgtggcctgctgggaacgctgctcttcgccacc
tcactgctcatcacgatgggagtgctgtgtgcatacgctgccaaccagaacctgagctct
caggtgaagaacatacggaggttggtcaacagcaacatgagggacctgcacaccttcgcc
aatgacacgccgatgcaaattgattacctaatatcccaatacgccactgccaagaacaaa
gtcatctatgacctagataatataggtccgttattgggtggaaggatacacgatcagttg
gataaggaggtccgtcctgccttggacagagtgctcaatattgctggagccatgcgagaa
accaaggaggccctggagaacgtcggtgtggctctggaggttctccaggaaggaacaggg
aagctcaacttcaacctgagtgtggtccggaccagcatcaaccgcacgctcaacgacccc
ggctgtcatgacgagaagtcagacgccacctcggcccagctgtgccgcaacatccgccag
tcgctgtcccagctgcagatcggcgcaaactacacacggctacccaaggtgactgctcag
ctggaaaaagtgaacgacgtactgagaacggacctcagtgctatcgtccagaggggctac
gcctctgtaaacgacacgccacatatggtggtggaacagaccagaagtgttgtggagagt
gtacggggtttggtggacggcattggcaataacattagcagcttttccaaggtattccct
gtgcagagttccctttccaacttcaccatcttcattagccacgcccatgccaagattgag
gaccactaccctgaaattgacaagatggacttctacaggtggattggctgcattgctctt
tgctgcatggtggtccttgtcctggcctttaactacctgggcctgctgtgtggcacgctg
ggatacgacaagcacgcctcgcctacgacgcgaggctgcatctccaacacaggaggaacg
atgctcatggccggcgttggatttaccgtcatcttctcctgggtgctgatgggagtggtg
accatcatcttcctggctggaggaaacatggagaaacttttttgtgaacctttccacacc
aaagaagtcttcaaggttgtggacaccccgtatcttgtcaacccagactggaagaacttc
atccctggctacatgtacaacgactccgacctggagctgacgtcagagagcttgtacagc
acgtgcaaagagaacaaaggcatctactcggccatgcgactggacaaagtcttcaacatc
tcattgttcctgaacacaacagtgtttactaaggatgtggtgagtcagctggacagcgtc
aagatcgacctgaggggaataatcctgttagaggcagaggggaaacagaacctcatggat
ttttctgaagcagggctgtcagaaatcaactacgcagactacctggaagaggtcaacaaa
ggagtaactgtggtcgacctgctctcattcgccagagatctggaggcccagacagacctc
atgcccagaggcgttctgcagaccgctctgaaaggccacgccggaactctgcggcagatc
cacagccaacagatcatctccatggagcaggccatgagtgcgttgaaccagagtatgagg
ttcctggagagaacagccacagacctgccaaacaaagttttagcagttcttgatgctatt
gaagctgcccagtacctcatctcccagaatgcaacaaatttaatcaatcgggaaacggga
aagtacaaggcgaccattgttggctacttccatcaatacatagaatgggtcaaaacatca
ttggctttggaggtcgcgccatgcaagcccttcagcaacatgctggacacggcggaaatc
attgcttgcagtttcttggtcgactccatgaacacattctggatgggccttggctgcagc
actctctttttgttccccagcatcatcctcgcagtgaaactagccaagtactaccgcagg
atggacacagaggatgtttacgatgacattgagacaattcccatgaaaactatggaaatt
ggtaataatggttatcatagtgagaacccacaaggtatcccaaatcctatgatgacaagc
gtccctacatatgacactatgaacaggttcccgcgggcctcggctcctccgaggcacatc
gactggtga
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