Anoplopoma fimbria (sablefish): 129090071
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Entry
129090071 CDS
T09102
Symbol
tsku
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
afb00535
]
129090071 (tsku)
Proteoglycans [BR:
afb00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
129090071 (tsku)
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_EndoS
LRR_NXF1-5
LRR_LRWD1
LRRNT
DUF4380
Motif
Other DBs
NCBI-GeneID:
129090071
NCBI-ProteinID:
XP_054453548
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All DBs
Position
1:6878830..6886567
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AA seq
348 aa
AA seq
DB search
MAFLLWLGLSLLSAVQSSGVKNCHRGCHCEVESFGLFDSFSLTRVDCRGLGPDTSMPIPI
PLDTAHLDLSSNAMGPLSDTMLAGPGYTTLVSLDLSSNSITKVTPNALSKLRYLETLDLS
HNNLESLSPSCFSGLPLVEVDLSHNSFQEFDMDVFATKVNGEPVSVDLSHNKLVSVSTTL
HGRVLHIQSLNLSSNRLLSVPMLAGLSLRYLNLDGNPIAKIKEGAFAQLKDLVYLSISGL
HELHEIEADSFKGLQSLQVLDLSKNPEFKTLSPAVFSGLDSLQELNLSGSGVSSLPSNML
THLPSIKSITLGQNMHCWRTQKQGQFHRQLGQVQHNEVLNCNVEGIVS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctcctgtggctcggcctgtcgctgctgtccgccgtccagtccagcggcgtc
aagaactgccaccgtggttgccactgtgaggtggaaagcttcggcctgttcgacagcttc
agcctgacccgggtggactgccgagggctgggacccgacacctccatgcccatccccatc
cctctggacacggcccacctggacctgtcctccaacgccatgggcccgctgagtgacacc
atgctagctggtccaggctacaccactctcgttagcttggacctaagcagcaactctata
acaaaggtaacacccaatgctttgtctaagctgcgctacctggagactctggatctgagc
cacaacaacctggagagcctttccccgagctgcttctccggcctccctctggttgaagtg
gacctcagccacaacagcttccaagagttcgacatggacgtgttcgctacgaaagttaat
ggcgaacctgtcagcgtggatctgtctcataacaagctcgtgtcggtctcgacgactctg
catggaagagttttacacatccaaagcttaaatctgtcgtcaaaccggctcttgagcgta
cccatgctggcgggactttcgctgaggtacctcaatctggatggtaaccccatcgcaaag
atcaaagagggagcttttgctcagctgaaagatctggtttatttgtccatcagtggcctc
catgagctgcacgagatcgaggcggacagtttcaagggcctccagagcctgcaagttctc
gatctctcaaaaaacccagagtttaagactctaagcccggcggttttcagcggactggac
tccctgcaggagctgaatttgtctgggtccggtgtttcatccttgccgagtaacatgctg
acccacctgcccagtattaagagcatcacgctgggacaaaacatgcactgctggaggacc
cagaaacagggacagttccaccggcaactgggtcaggtccaacacaacgaggtgctgaac
tgtaacgtggagggcatcgtgtcgtga
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