Anoplopoma fimbria (sablefish): 129090121
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Entry
129090121 CDS
T09102
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129090121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129090121
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129090121
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GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
PDS5
DHR-2_Lobe_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
129090121
NCBI-ProteinID:
XP_054453619
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Position
4:complement(19604589..19625244)
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AA seq
1222 aa
AA seq
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MASEDSLLDSVEEMDDFSDSGSDYEATLKATKRRKPALPASRPPKRPRHKAALSVSSPRS
SPIPTPPGPSLQQQQPSRRTSRQASPTPVTRVNEGNRGISAENIYDAVRSGKSAMVTVVD
EWLDSYKQSREAGLLVLINFIVQSCGCKGVVSREMLDSMQNAEIIGTLTKEFNEDSVNYP
LCTPGPQLRRFKAGLCEFVRVLVRSCRNSLIYDEYLFPSLLALLTGLSDSQVRAFRHTST
LMAMKLMTGLVEVAVLVSVQLQTTQRQYDMENSKGAHDRAPGRLEELQATISELQENREE
ISSMMNGTFRGVFVHRYRDRLPDIRATCIEELGMWLKTDPEDFLNDGCLKYLGWTLHDKQ
SPVRLQCVRALQGLYQEKEFIGRLELFSSRFKERMLSMVQDKDPEVAVEMVNLLLLIQQR
TEEGLSEEECAHIYPLVYASNRALASVAGVFLFNKLKSVIASDNQENDKSETAAFFQILI
SFYIQSEFHEHGAYLVDSLWGVARSELGHWETMTAMLLQEAGLMYEEEGALIELMMCAIR
QAAQATPPVGRTQGRKILGMKDKKVQEQDRRRITTHFIPLLPQLLAKYSADAGKVSLLLK
APLYFSLEMYSSIPRLEKHLDLLLSQVCGIMEKHTEVTVLEACANLVGTLCADRYTFSSR
AHMAFSQLMDGLTECLNAYLSDLVQCTADDDDVYSAATALKRIAALSSAKDPTGWKLFDS
CLELLKSGMESRELDKELMVSALKSAAFYLMWAKVNAVNSTPAEGELKRLKKEMRSFCKV
CEMCLSLNQTEIRDQAFELLCDLLLLYSTSSARFEPALQTLVHLPSDSLRSEMAAFLLDY
VFSDTEDDELDAECEEALKITLLQRKRNQLAGYCKLVIYGVLDLTAATNVFKHYSKYFKD
FGDIIKETVSKSKLINPVQSAKAVCLSLQQLFSEMLTEDHSRQDLGEIRDLAKRLAMSFG
IDLKRARKPLVALHTEGVRFAFRDPPEGEEQQSNVAFLEILSEFSFKLLRQDRAVLAVLL
KSECPTAALSWPSVRMYQRSLEGRSTAKAREQEEGGDAGSSHITPVAKRKRTTAQGSAAS
TVRGSWLDSISIHSSIPTPALTSTVQRQTAKQLASRATESDIGSGLTEPEPESEDEFSLG
SSMRKVKPIKQRRLSSSQTGPSSTQQDLNSHLTLLSLIEDDNEEGGEEPEIEDYESDSDH
ESEYTLPSTRHTSASVLDELFD
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaagactcccttttggacagtgttgaggagatggatgacttctcagattct
ggcagtgactacgaggccacgttgaaagccacaaagcggagaaaaccggcattacctgca
tctcggccacccaagagacctaggcataaagctgcattgagtgtgtccagccccaggagc
agccccatccccactcctcctggcccctccttgcagcagcagcagccctcccggaggaca
tctaggcaggcgtctcctacacctgtgacaagagtgaacgagggtaaccgcggcatcagt
gcagagaatatctatgatgctgtccgctctggaaagagtgccatggtgacggtggtcgac
gagtggctggacagctacaagcaaagccgagaggcggggctgctggtgctcatcaacttc
attgttcagtcctgtggatgcaaaggtgtggttagcagagagatgttagacagcatgcag
aatgctgaaatcatcggcacactaaccaaagagttcaatgaggattcagtgaactaccct
ctgtgcactccgggcccccagctgaggcgtttcaaagccggcctgtgcgagtttgttcgg
gttctcgtgagatcgtgtcggaatagcctcatttatgacgagtacctcttcccctccctg
ctggctctgctcaccggcctctctgactcccaggtcagagccttccgacacaccagtacc
ctgatggccatgaagttgatgactgggttggtggaagtagctgtgctagtgtcagttcag
ctgcagaccacccagcggcaatacgacatggagaacagcaagggggcgcatgacagagcc
cctggcagactggaggagctgcaggccaccatcagtgagctgcaggagaacagagaggag
atatcctccatgatgaacggcacgttccgcggtgtgtttgtgcatcgttatcgtgaccgg
ctgcctgacattcgggccacatgcatagaggagttgggcatgtggctgaaaacggaccct
gaagacttcctgaatgatggatgtcttaaatacctggggtggaccctgcatgacaagcaa
agtccagtgcgtctgcagtgtgtgcgtgccctgcagggtctgtaccaggagaaggaattc
attggccgcctggagcttttcagcagtagatttaaagagaggatgctcagcatggtacag
gacaaggacccagaggtggcagtggaaatggtcaatctgttgctgctgatccaacagagg
acagaggaaggtctgagtgaggaggagtgcgctcacatctatcccctggtttacgcttca
aacagagccctggcttctgtagccggcgtcttcctctttaacaagctgaaaagtgtgatt
gccagtgacaaccaggagaatgataaaagtgaaactgcagccttctttcaaatcctcatc
tccttctacatccagagtgagttccatgagcacggggcctatctggtggacagtctgtgg
ggtgtggcaagatctgagctgggacactgggagactatgacggcaatgctgctacaggag
gctggtctgatgtatgaggaggagggggctctcatagagctgatgatgtgtgccatccga
caggcagcacaggcaaccccacctgttgggagaactcagggcaggaagatcctgggcatg
aaggataagaaagtccaggaacaagacaggagacgtatcaccacacacttcatcccatta
ctgccacagctgctggccaagtactcagcagatgcagggaaggtgagcctccttctcaaa
gctcccctttacttttctctggagatgtacagcagcattcctcggctagagaagcatctg
gacctgctgctgtctcaggtatgtggtattatggagaagcacacagaggtcaccgtgctg
gaggcttgcgccaacctggtcggcaccctttgcgccgaccgctacaccttctcctcccgc
gcacacatggcgttcagccagctgatggacggcctgactgagtgcctcaacgcctactta
agtgaccttgtgcagtgtactgcagacgacgatgatgtctacagtgcagccactgctttg
aaaaggattgcagccctgagcagtgccaaggacccgacaggctggaagctgttcgactcc
tgtctggagcttctgaagagcgggatggagtccagagagctcgataaagagctcatggtg
tcggctctgaaatcggctgccttttacctgatgtgggctaaagtgaatgcagttaactcc
acaccagctgagggggaattgaagcgtttgaagaaggagatgcgttcgttctgcaaagtt
tgtgaaatgtgtctgtctctgaaccagactgagatcagagatcaggcatttgagctgttg
tgtgacttgctgctcttgtacagtacgagttcagcccgctttgaacccgccctccaaacg
ctggtccacctgccgtccgactccctgcgctctgagatggctgctttcctcctggactac
gtcttctcagacactgaagatgatgagctcgatgctgagtgtgaggaggcgttgaagata
actcttctccagaggaaacgcaaccagctagctggctactgtaagctggtcatctacggg
gtgctggacctcaccgctgccaccaacgtcttcaagcactacagcaagtactttaaagac
tttggcgacatcattaaggagactgtgagcaagagcaagctcatcaatcccgtacagagc
gccaaggctgtctgtctgagtctgcagcagctgttctcagagatgcttacggaggaccac
agcaggcaggatctcggtgagatcagagacttggccaagaggcttgccatgagctttggc
atcgatcttaaacgtgcccgcaaaccactggtggccctgcacacggaaggtgtacgtttt
gcatttcgggacccaccagagggagaagagcagcaatcaaatgtggccttcctggagatc
ctcagcgagttcagtttcaagctgctgcgacaggaccgcgctgtgttggccgtgcttctg
aaatcagagtgtcccactgctgccctctcctggccgtcagtcagaatgtatcagcgatcc
ttggagggccgctccactgctaaagccagagaacaggaggagggaggagatgccggctcc
tctcacattacccctgtagctaaacgcaagaggacaactgctcagggttcagcagccagc
acagtccgaggatcctggttggacagcataagcatccacagcagcattccaactccagcc
cttacctccactgttcagagacagacagccaagcagctggcctccagagccacagagtct
gacatcggcagcggcttaactgagccggagccggagtctgaggatgagttctccttaggg
tccagtatgcgaaaggtgaagccaatcaaacaacgccggctctcctccagccagaccggt
cccagttctactcagcaggacctgaactcccacctcaccttactatctctgattgaggac
gacaatgaagaaggaggagaggagccggagattgaggattacgaaagtgactctgaccat
gaatctgaatatacactgccttcgacacgacacacgtccgccagtgtccttgatgagctc
tttgactga
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