Anoplopoma fimbria (sablefish): 129090160
Help
Entry
129090160 CDS
T09102
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38
KO
K10313
F-box protein 38
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129090160 (fbxo38)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129090160 (fbxo38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
129090160
NCBI-ProteinID:
XP_054453674
LinkDB
All DBs
Position
4:complement(5308335..5326306)
Genome browser
AA seq
1212 aa
AA seq
DB search
MGPRRKASKLQPVVGSSGGELVLRPSEPKDYINELSHEVLCHIFRYLPMKDIMCMECLSR
KLREAVTLYLRVVKVVDLCAGRWWEYMPSGFTDSSFLLLLKKMPDLEQLYGLHPRYLDRR
RVRGYESFSIPGALEALQACPNILGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIP
AENKLTIPITAKIQTLHLVGVNVPEIPCLPMLRHLYLKWVRFTKPQPFKDFLCVSLRTFV
MRNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTI
VFGACKNALEVDLGYLIITAARRLHELRIQPSLTKDGVFSALKMAELEFPQFETLHLGYV
DEFLLQCKLSHSELVKYGLADVIENPGIITDIGIKMVNEVFTNIKYLLIYNCPHLHNPHH
WITDQSRWSRLVDLTLVRCHAIKLESFSQFIELLPSLEFICLDQMFREPPKGCARVGLSA
GTGIGVSSALVSNQNSNNDNDNNNNNHHHHNNEANLPAAPPPVVNNNNNININNNNQRRQ
QQNNAPVEVNGMDDEEEEGEEEVMLEEENMDAGPRLELKGAEGEVRVEEADVALGPSGPA
GAPQHPDEEQAGPSGLVQQCRPAGATVPKPPLVISDSDSEEEEGLVSRLMPASCLQQPAS
CTEGKGKTPLRRSNNVTVSVAVSVDQTKTRVLESSCEKSCQVTSEQIKADMKAAADTSRR
TSVKGLATEAVETAARPGADSGPVRGTGSAGAAARTGVRPVAGSVDRVGPGAATSRQVGG
CGRLVVGTTHRATTTTDRATGTGRTNDCTEGPSCTQTGESSTRETGMRQSSGPACADSPE
PRGAAVNHASRRTALLTGQGERQPAPAGSASATFSGSQQGQAIDEFVPRRPLTRSCTRTC
SVSLISETDLSKARPRVAVRRKRMADKSTSTSDPVTEDDHVQILSLKSKNLVGITLTNCG
ITDLVLKDCPKMMFIHATRCRVLKQLRVESAPIVNRFDYAQCKKLDMEQVLDQILRMPPE
RNRIIYMRPMHQIDSVALERQLFQGPYPYHIAIMHEFSNPPNIRNKVRIRSWMDTIANIS
QELIKYEFFPEATRTEEDVKKYPTYPWGRDIYTLEGLVDGAPYSMITDFPWLRTLRAADP
NSYARYDFEDDESTTIYAPRRKGQLSADICMETIGEEISERRQSKRGVFQRVVVLFLHHC
DTPGEPVDDDYI
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaggaggaaggcctctaaactccagcctgtagtgggcagcagtggaggggag
ctggtgctgagacctagtgagcccaaagactacatcaatgagctgtcccatgaagtcctc
tgtcacatattcaggtacctccccatgaaggacatcatgtgtatggagtgtctgtccaga
aagcttcgggaagcagtgactctgtacctgcgagtggtcaaggtagtggatctgtgtgct
ggtcgctggtgggagtatatgccttcaggctttacagacagcagctttctgctccttttg
aagaagatgccagatttggagcagctgtacggcctccaccctcgatacctggacaggaga
cgagtccgaggctacgagtccttcagcatacccggagccctggaggcactacaagcctgt
cccaatatactgggggtggagacatctcatctggagctggtggaagccatatggaactat
atgccccaggttcatatactgggaaagttccgtaaccgtaacggagcttttccaattcct
gctgagaacaaactgaccatccccatcaccgctaagatccagacactacatctagtgggt
gtgaatgtcccagagatcccctgtttgcccatgcttcgccacctttatctgaagtgggtc
cgtttcaccaaaccgcagccgttcaaggactttctgtgtgtgagcctgagaactttcgtc
atgcggaactgtgcaggaccaaccaactccctcaaatatgttcccctggttactgggtta
gcatcagcccggaacctggagcagctggagttggtgagagttcccttcctgggagggctg
atccaacacgtggtggaggacagttggaggtcaggaggatttcggaatctccacaccatt
gtgtttggagcctgtaagaacgctctggaagtggacttgggctacctcatcatcaccgct
gctcgcaggcttcatgagctgcgcatccagccttcactgactaaagatggagtcttctca
gctctcaaaatggctgaactagagtttcctcagtttgagacacttcatctgggatacgtg
gacgagttcctgctgcaatgtaagctgagtcattcggagctggtgaagtacggtctggct
gatgtcattgagaaccccggcatcatcaccgatatcggcataaagatggtgaacgaggtg
ttcactaatattaaatacttgctcatctacaactgtcctcacctgcataaccctcaccac
tggatcacagatcagtccagatggagtcgcctcgttgatctcaccctggtgcgctgtcat
gctatcaaactggaatccttctcccagttcatagagttactgcccagtctggagtttatc
tgtctggaccagatgttcagagaaccacccaagggctgtgccagggtgggcctgagtgca
ggaactggtattggcgtgtcctcggcactggtcagcaaccagaactccaacaatgacaat
gacaacaacaacaacaaccaccaccaccacaacaatgaggccaacctgcctgctgctcct
ccacctgtcgtcaacaacaacaacaacatcaacatcaacaacaacaaccaaagacggcag
cagcagaacaatgcaccagtggaggtcaatgggatggatgatgaggaggaagagggggaa
gaggaggtgatgctggaagaggagaacatggacgctgggcctcgattagagctgaaagga
gcagaaggggaggtgagagttgaggaggctgatgtggctctgggtccaagcggtccagct
ggagcaccacaacatcctgatgaggagcaagcaggtcccagtggtttagtccagcagtgc
agaccagctggtgccacggttccaaagcccccgctggtcatctcagactcggacagtgag
gaagaggagggccttgtttcaaggctaatgccagcttcctgtctacagcagccggcttcc
tgtacagaaggtaaagggaagactcctctgaggcggagcaacaatgtgactgtatcggtg
gcggtctcggtggatcagacaaagactcgggtgttggaaagcagctgtgagaagagctgt
caggtgaccagcgaacagatcaaggccgacatgaaggctgctgctgataccagcaggagg
actagcgttaaaggacttgccactgaggcagtggagaccgctgcaaggcctggggctgac
agtgggccagtacggggcactgggagtgctggggcagcagcaaggaccggggtgaggcca
gtggccggatcggtggacagggttggacctggagctgccacatccaggcaggtgggtgga
tgtgggaggcttgtggtggggaccacccacagagcaaccactaccactgacagagccaca
ggaactggcaggactaatgactgcacagagggcccctcttgtacacagactggggaaagt
tccacaagagagaccgggatgaggcagagttctggtcctgcctgtgcagacagtccggag
cccagaggtgctgctgtaaaccatgcttccaggagaacagcactactgactggacaggga
gagagacaacctgctccagctggatcggcctccgccacgttttcaggttcacagcagggt
caggccatagacgagtttgttcccagacggcctttgacccgatcctgcactcgtacgtgc
tctgtgtccctgatatctgagacagatctttccaaagccaggcctcgagtagcagtgagg
aggaaacgaatggctgacaaatcaaccagcacctcagacccagtcactgaggacgaccac
gtgcagattttgtctctgaagagtaagaacctggtgggcatcactctgaccaactgtggg
atcaccgacctggtcctcaaagactgccccaagatgatgttcattcatgccaccagatgt
cgagtgttgaagcagctgcgagtagaaagtgcacccatagtgaacaggtttgattatgct
cagtgtaagaagctggacatggaacaggtcctggatcagatactgaggatgcctcctgag
aggaaccgcatcatctacatgcgccctatgcaccagatcgactctgtggcgttggagcgt
cagctcttccaggggccctatccctaccacatcgccattatgcacgagttcagcaaccca
ccaaatatacgcaacaaggttcgcattcgcagctggatggacaccatagccaacatcagc
caagagttgatcaagtacgagttcttcccagaggccaccaggacagaagaggatgtgaag
aagtatcccacatacccctggggccgggacatctatactctggagggactggtggatggt
gctccctacagcatgatcacagacttcccctggctgaggactctgagagccgctgacccc
aacagctacgcccgctacgactttgaagacgacgaaagcaccaccatctacgctcccaga
cgcaaaggccagctgtcagccgacatctgcatggagaccatcggggaggagatctcagag
cgccggcagagcaaaaggggagtgttccagagggtggtggtgctcttcctccatcactgt
gatacgccaggagaaccggtggatgatgactacatctag
DBGET
integrated database retrieval system
