Anoplopoma fimbria (sablefish): 129090209
Help
Entry
129090209 CDS
T09102
Symbol
nectin3a
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecules
afb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129090209 (nectin3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129090209 (nectin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129090209 (nectin3a)
04090 CD molecules [BR:
afb04090
]
129090209 (nectin3a)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Nectin family
129090209 (nectin3a)
CD molecules [BR:
afb04090
]
Proteins
129090209 (nectin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
V-set
ig
I-set
Ig_2
Keratin_assoc
Lep_receptor_Ig
C1-set
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
129090209
NCBI-ProteinID:
XP_054453736
LinkDB
All DBs
Position
1:23691498..23723614
Genome browser
AA seq
552 aa
AA seq
DB search
MENRSPFRRTLPSNGLRLLTSLLTFYGLTSGVSSNQVIVPEKVNAVLGKNITLGCRIEVG
SNLTQSSWERRLPSGTITLAVFNPEFGISISPDYAKRISFVSPSVRDATITIEGAGFADV
GSYTCKVVTFPLGNTQASAYVNVLVEPKVYVSASPTALLDGGNESLVATCIAERGRPAAE
VFWETGLYGRSEKQSQHEPNGTTTVQVHYMWQPQSYAQGKMLTCVVRHPALQTEFRIPYI
LNVQFAPVVSIIGIDKNWFVGQENVKFICGAKANPPARHFTWTRLDGLMPEGVEKSNNSF
AFTRPLERNDSGVYRCEVINDIGLHSQDVNLWVQDPPPTTAAPSTTASLLHDTSGTGTAA
DQRRALFTSPTLASLHDSSLGTIVGGAVGGVLFLILLLILGGACFMRQRRTFRGDYYTKQ
YLGPSDMQKESQLDVLQPHELQEVYGDKTSKGSQELKPKLGGDIIYPDYTPDHKDRDDWA
DKGDNHRGLKEGNYYPDHYNTQNMHPCGPPVHSPTVNNGSPYLPEDCYDNGTDSDYVSHM
DGSVISRREWYV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagatcgcccttcaggaggactttgccatctaacggactgcgacttttaaca
tcacttctcaccttttacggacttacctcaggtgtgagcagtaaccaggtgattgttcct
gagaaagtgaatgcagtgctggggaagaacatcacactgggttgcagaatagaggtgggc
tccaacctcacacagagctcctgggaacgccgtcttccctcaggcaccattaccttggca
gtgttcaaccccgagttcggaatctccatctctccggactacgccaagcgcatttcgttt
gtttccccctcagtacgagacgctaccattaccattgaaggggctggctttgcagatgtc
ggctcctacacctgcaaagtggtaacatttcctctgggcaacacacaggcatcagcctat
gttaatgtattagtggagccaaaggtgtatgtgtccgccagccccacggctctgctggac
ggtgggaacgagtcactggtggctacctgcatagccgagcgcggccgtcccgctgctgag
gttttctgggagacggggctgtatggacgaagtgagaagcagagtcagcacgagcccaac
ggcacaaccaccgtacaagtgcactacatgtggcagccgcagagctacgcccaggggaag
atgctcacatgtgtggtgcgccacccggccctgcaaacagagttccgcataccatacata
ctaaatgttcagtttgcacccgtggtatcgataataggaattgataaaaattggtttgtg
ggtcaagagaatgtaaagttcatctgtggagccaaagccaacccacctgcccgtcacttc
acatggaccaggttggatggattgatgcccgagggtgttgagaaatcaaacaatagcttt
gctttcactcgcccgttggagcgcaatgactctggagtgtaccgctgtgaagtgataaac
gacatcggtctgcacagtcaagatgtgaacctctgggtacaagatcctccccccaccacg
gctgcccccagcaccactgcatccctcctccacgacacatctggaacgggcaccgccgcg
gaccagcggagagccctgttcacctccccgaccctggcctccctacacgacagcagcctg
ggtaccatagtcggcggggctgtgggcggagttttattcctgattctcctgctgatcctt
ggcggggcctgcttcatgcgacagcgcaggaccttcagaggggactactacaccaaacag
tacctgggaccctccgacatgcagaaggagtctcagctggacgtgctgcagccgcatgag
ctgcaggaggtctacggggacaagacgagcaaaggcagccaggagctgaaacccaaactg
ggtggagacatcatttaccccgactacacccctgaccacaaggatagggatgactgggcc
gacaagggggataaccacaggggcctcaaggagggaaactactacccagatcactacaac
acccaaaacatgcacccctgcgggcctcctgtgcacagccccacagtgaacaacggctcc
ccctacctgccggaggactgctatgacaatggtacagacagcgactacgtgtcccacatg
gacggatctgtgatctcacgcagggagtggtatgtttga
DBGET
integrated database retrieval system
