Anoplopoma fimbria (sablefish): 129090260
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Entry
129090260 CDS
T09102
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129090260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129090260
03016 Transfer RNA biogenesis [BR:
afb03016
]
129090260
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
129090260
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
129090260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
129090260
NCBI-ProteinID:
XP_054453816
LinkDB
All DBs
Position
4:14149956..14155918
Genome browser
AA seq
483 aa
AA seq
DB search
MGNEDDDVEQGSKHNIFFIEDLNSSEGEEEIKFSQRKRPSSCKQAARLSRESSPPLLLAF
NITSGRSLQLSSPKPTSSSDSQEEEEEKEDRDRPVEEWMLLGGEEQVGDSSIQLNLSYWD
ISGDEDQTVESVKDTWTVSERDKRGGDQSRPSRYFMTGRSLICNICKKTGHLAKSCYYYK
KCPTCVLCGIQGHIQRDCPGRPCPSCGLPSHGLRPCKRPCVWNQHCQRCGMSGHLSDACP
DTWRQYHLTIRLEIPVKPWTVHILKKKKCPAHCYNCSKRGHHGFDCTKRRMISGTFPSLP
YVCHYDTIEDILQCRTRKHKRGKEHMSAGPVPLSDQQHLSEATGESGEENQPVQGKRTKQ
DTCGRADKRKKWPERRKERREVKKLRRDAQARRGGGLPERTRKNFNDEVCPADLRCHKKH
TPPPQKRKNEAGGKSKKSRETERWKKRGGMKRGDLRPNGDVNTRSKSLPSPKQKVCHRKR
YFN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgaagatgatgatgttgaacaaggcagcaaacacaacatcttctttattgag
gacctaaatagttcagaaggagaagaagagatcaagtttagtcaaaggaaacgtcccagc
agctgtaaacaggctgcacggctcagcagggaaagctctcctccgctcctcctggcattc
aacatcacctctggacggtcgctgcagctcagcagcccgaagcctacttccagttcagac
tcacaggaggaggaggaggagaaggaggacagggaccggcccgtcgaggagtggatgctc
cttggaggagaggagcaggtgggagattcaagcatccagctcaacctgagctactgggac
atctctggagatgaagatcagactgtggaatcagtgaaggatacctggactgtatcagag
agagacaagcgtggtggtgatcagtctcggcccagccgctattttatgactggtcgttct
ctgatctgtaacatctgcaaaaagacgggacaccttgcgaaaagctgctactactataag
aaatgtcccacctgtgttctttgtgggattcagggccacatccagagagactgtccgggc
cgcccctgccccagctgtggactgccgtcacacggcctcaggccctgtaaaaggccctgc
gtgtggaaccaacactgtcagcgctgcgggatgtcagggcacctctccgatgcctgccct
gatacatggagacaataccacttgacgatccggttagagattccagtcaagccatggaca
gtccacatcctcaaaaaaaagaaatgccccgcccattgttacaactgctctaagagggga
catcatggctttgactgcactaaaaggaggatgatcagtgggacatttccctcactgcca
tacgtttgccactatgacaccatcgaggacatcctccaatgtcgcaccaggaagcataaa
agaggcaaagagcatatgagtgctggaccagtgcctctgtcagaccagcagcacttgtct
gaagcaacaggagagagtggggaggagaatcagccagtccaggggaagaggacaaagcag
gacacatgcggcagggcggacaagaggaagaagtggccagagaggcgcaaagagagacgg
gaggtgaagaagcttaggagagatgctcaagccagacgaggaggaggactaccggaaaga
acccggaagaactttaatgatgaagtttgccctgcagacctccgctgtcacaagaagcac
acaccccctccacagaagaggaagaatgaggcaggtggtaaaagcaagaagagcagagag
actgagaggtggaagaagagaggagggatgaaacgtggggatttacgtcccaatggtgac
gtaaacacccgtagtaaaagccttccttctccaaaacaaaaagtatgccacagaaaaaga
tattttaattga
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