Anoplopoma fimbria (sablefish): 129090268 Help Entry 129090268         CDS       T09102                                  Symbol thoc3 Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03013   Nucleocytoplasmic transport afb03040   Spliceosome Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129090268 (thoc3)   09122 Translation    03013 Nucleocytoplasmic transport     129090268 (thoc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:afb03019]     129090268 (thoc3)    03041 Spliceosome [BR:afb03041]     129090268 (thoc3) Messenger RNA biogenesis [BR:afb03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      129090268 (thoc3) Spliceosome [BR:afb03041]  Complex C   Other components    EJC/TREX     129090268 (thoc3)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     129090268 (thoc3) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Vps41 eIF2A Beta-prop_WDR36-Utp21_1st DSE1_N WD40_RFWD3 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 Tricorn_2nd WDR90_beta-prop_4th PD40 TRM82_WD PAC11 Beta-prop_ACSF4 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 ASA1 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_Nup120_160 Cytochrom_D1 WD_LRWD1 Beta-prop_WDR11_1st DPPIV_N Beta-prop_ELP1_1st TP_0598_N Beta-prop_SCAP Motif Other DBs NCBI-GeneID:  129090268 NCBI-ProteinID:  XP_054453828 LinkDB All DBs Position 4:27329965..27336889 Genome browser AA seq 322 aa AA seqDB search MASRYYQEMQESFRSNNKSREFPAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW SPDGQTIAVGNKDDVVTFIDAKTHRSRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINVL SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPV RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAYACDDK EGKYDNNREAGTVKLFGLPNDS NT seq 969 nt NT seq  +upstreamnt  +downstreamnt atggcgtccaggtactaccaggagatgcaggagagcttcaggagcaacaacaagagtcgg gagttcccggcgcacacggccaaggtgcactctgtggcctggagctgcgacggccgccgg ctggcgtccggctcgttcgacaagacggccagcgtgttcgtgctggagaaggaccggctg gtgaaggagaataactaccggggacacggggacagcgtggatcagctctgctggcatcca acaaacccagacctgttcgtcacggcgtcaggagacaaaaccatccgcatctgggacgta cgcaccaccaagtgcatcgccaccgtcaacaccaaaggagagaacatcaacatctgctgg agtcctgacggtcagactatcgccgtcggcaacaaggacgacgtggtgacgttcatcgac gccaagacgcatcgctccagagcggaggagcagttcaagtttgaggtgaacgagatctcc tggaacaacgacaacgacatgttcttcctcaccaacggcaacggctgcatcaacgtcctg agttatccggagctgaagcccatccagtccatcaacgctcacccgtccaactgcatctgc atcaagttcgaccccacggggaagtactttgccacgggcagtgcggacgccctggtcagc ctgtggaacgtggaggagctggtgtgtgtgcgctgcttctccaggttggattggccggtg agaactctgagcttcagccacgacgggaagatgttggcctcggcctccgaggatcacttc atcgacatcgcagaggtggaaacaggagagaagctgtgggaggttcagtgcgactctccg accttcaccgtggcctggcatccaaagaggcctctgctggcgtacgcctgcgacgacaag gagggcaagtacgacaacaaccgggaggccggcaccgtcaaactgttcggcctccccaac gactcctga

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